Gene Plav_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1389 
Symbol 
ID5456236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1519424 
End bp1519831 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content62% 
IMG OID640876962 
Producthypothetical protein 
Protein accessionYP_001412666 
Protein GI154251842 
COG category[S] Function unknown 
COG ID[COG3824] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGA ACGGCGTACG CGCGCCCTCG CTGGCGGATT TCGAACGATT GGCGGACGAG 
GCTTTCCAGC GCCTGCCGGA AGCCTTCCGC GCGCGCTGCG AAGGGCTCAT CATCCGCGTC
GAGGATTTCC CGGATGATGA AGTCGCCGCC GAAATGGAGC TCGAAAGCCC GTTCGATCTC
CTCGGCCTCT ATCAGGGCAT CTCCCATGTC GACCGCTCGG TGATGGAGCC GGCGCATATG
CCGGACATGG TCTTTCTCTA TCGCCGCCCC ATGCTCGATT ACTGGGCGGA ATATGACGAG
CCCCTCGAAG GCCTCATCGC GCATGTGCTG ATCCACGAGA TCGGCCACCA TATGGGCCTC
TCCGACGACG ACATGCACGC GATAGAGGAA GCGGCGGGAC TGGAGTAA
 
Protein sequence
MDWNGVRAPS LADFERLADE AFQRLPEAFR ARCEGLIIRV EDFPDDEVAA EMELESPFDL 
LGLYQGISHV DRSVMEPAHM PDMVFLYRRP MLDYWAEYDE PLEGLIAHVL IHEIGHHMGL
SDDDMHAIEE AAGLE