| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1387 |
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| Symbol | |
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| ID | 5455892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1518179 |
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| End bp | 1518961 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876960 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001412664 |
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| Protein GI | 154251840 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG ACAGCAGCAT CAGCGCCATC ATCACCGGCG GCGCCTCCGG CCTCGGCGCG
GCGACGGCGC GCGCGCTCGC CAAGCAGGGC GTGAAGATCG GCATTTTCGA TCTCCAGGAA
GACAAGGGCG AGGCGCTGGC GAAGGAACTC GGCGGCGTCT TCGCGAAAGT GAACGTCACC
GACGAAGCGA GCGTCGATGC GGGCTTCGAG AAGGTCCGCG CCGCCATCGG CCAGGAGCGC
ATCCTCGTGA ACTGCGCCGG CACCGGCAAT GCGGTCAAGA CCGCGTCGCG CAACAAGGAA
ACCGGCAAGC CGGAACACTT CCCGCTCGAC AAGTTCAACC TCATCATCCA GATCAACCTT
GTCGGCACCT TCCGCTGCAT CGCGAAGTCG GCGGCCGGCA TGCTGACGCT CGATCCGCTC
GAGGATGGCG ATCGCGGCGC GATCGTGAAC ACCGGCTCCG TCGCCGCGCA GGACGGCCAG
ATCGGCCAGG CCGCCTACTC CGCTTCCAAG GCCGGCGTCG TCGGCATGAC GCTTCCCATC
GCGCGCGATC TCAGCCGCGA AGGCATCCGC GTCAACACGA TCCTGCCCGG CATCTTCGAC
ACGCCGCTCC TTGCCGGTGC GCCGGAAAAG GTTCGCCAGG CGCTCGGCGC CCAGGTGCCT
TACCCGTCCC GCCTCGGCAA CCCGGACGAG TACGCCTCGC TCGCCTGCGA AATGATCCGC
AACGGCTACT TCAACGGCGA AACCGTCCGC CTCGACGGCG CGATCCGCAT GGCGCCGCGC
TAA
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| Protein sequence | MKLDSSISAI ITGGASGLGA ATARALAKQG VKIGIFDLQE DKGEALAKEL GGVFAKVNVT
DEASVDAGFE KVRAAIGQER ILVNCAGTGN AVKTASRNKE TGKPEHFPLD KFNLIIQINL
VGTFRCIAKS AAGMLTLDPL EDGDRGAIVN TGSVAAQDGQ IGQAAYSASK AGVVGMTLPI
ARDLSREGIR VNTILPGIFD TPLLAGAPEK VRQALGAQVP YPSRLGNPDE YASLACEMIR
NGYFNGETVR LDGAIRMAPR
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