Gene Plav_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1386 
Symbol 
ID5456838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1517499 
End bp1517918 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID640876959 
Producthypothetical protein 
Protein accessionYP_001412663 
Protein GI154251839 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTT CTCACGGAAA TCCGGGTGCG GAAAGCGCGG AAACCGAGCT TCGGGACCCG 
AAATATCAAT TGCCCGCCGT GATGGCGCGC AACGAGGAAA CCGTGCGCGA GGGCTTCTGG
AAGAAGATGA CACGCGTCGC CGGAAAAATT CCCTTCGCGG AGGAAGCGGC CGCCGCCTGG
TATTGCGCGC GCGACCCCGA AACGCCGACA CGCGTGAAGG CGACGCTGCT GGCGGCGCTC
GCCTATTTCG TCATGCCTGT CGACCTCATC CCCGATTTCG TCGCCGTGTT CGGCTTCACG
GACGATGCGA CCGTGCTGAT GGCGGCGCTG GGGCTCGTCT CCAGCCACAT GAAGCCGCGC
CACCGGAAAG CCGCCCGCCA GGCGCTCGGA CTGCCGCCCG CCGAAGAAGA GAAGAACTGA
 
Protein sequence
MSSSHGNPGA ESAETELRDP KYQLPAVMAR NEETVREGFW KKMTRVAGKI PFAEEAAAAW 
YCARDPETPT RVKATLLAAL AYFVMPVDLI PDFVAVFGFT DDATVLMAAL GLVSSHMKPR
HRKAARQALG LPPAEEEKN