Gene Plav_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1382 
Symbol 
ID5456070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1513695 
End bp1514699 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID640876955 
Productalcohol dehydrogenase 
Protein accessionYP_001412659 
Protein GI154251835 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTG TTCTGTGCAA GGAATACGGG CCCCCCGAGA GCCTCGTCAT CGAAGAGGTG 
CCGACGCCCG AGCCAAAGAA GGGCGAAGTG CTGCTTGAGG TTCATGCCGC AGCGGTCAAT
TTCCCCGACG TCCTCATCAT CGAGAACAAA TACCAGTTCA AGCCGCCGCT GCCCTTCTCG
CCGGGTGGCG AGGTGTCGGG CATCGTGGTC AAGGTCGGCG AGGGTGTCGA CAAGGTGAAG
GTCGGCGACC GCGTCATCGG CTCGTGCGGC TGGGGCGGCT TCGCGGAAGA GATCGCGCTC
GACCAGGCCC GCGTCACGCC GATCCCCGAC GAAATGGATT ACGTGACGGC GTCCGCCTTC
CTCATGACCT ATGGCACATC GCATCACGCG CTGAAGGACC GGGCGAACCT GAAGCCGGGC
GAGACGCTGC TCGTGCTCGG TGCCGCGGGC GGCGTCGGCC TCGCCGCCGT CGAGCTCGGC
AAGGCGATGG GGGCCCGCGT CATCGCGGCC GCCTCCTCGG AAGAAAAGCT CGCCGTCTGC
AAAGAGCATG GCGCGGACGA GACGCTCCTC TATCCGACAG GCGCGCTCGA CAAGGATGCG
CAGAAGGCGC TCACCGACAA GATCAAGGAA CTGACGGGCG GCAATGGTGC CGATGTCGTC
TACGATCCGG TCGGCGGCGA CTATTCGGAA CCGGCGCTCC GTGCCACCAA CTGGGAAGGC
CGCTTCCTCG TGGTCGGCTT CGCCGCCGGC CCGATCCCGA AAATCCCGCT CAATCTTGCG
CTCCTGAAGG GTTGCCAGAT CGTCGGCGTT TTCTGGGGCG CCTTCACCGG CCGCGAGCCG
AAGCGCCATC AGGAAAACCT GAAGGAGCTG ATGTCATGGT TCAAGGCGGG CAAGCTGCGC
CCGCATGTCT CGCGCACTTA CAAATTCGAG GAAGCCGCGC AGGCGCTGAA CGATATGGCT
GCCCGCAAGG TCAAAGGCAA GATCGTCATC GTGCCGTCGC GGTAA
 
Protein sequence
MKAVLCKEYG PPESLVIEEV PTPEPKKGEV LLEVHAAAVN FPDVLIIENK YQFKPPLPFS 
PGGEVSGIVV KVGEGVDKVK VGDRVIGSCG WGGFAEEIAL DQARVTPIPD EMDYVTASAF
LMTYGTSHHA LKDRANLKPG ETLLVLGAAG GVGLAAVELG KAMGARVIAA ASSEEKLAVC
KEHGADETLL YPTGALDKDA QKALTDKIKE LTGGNGADVV YDPVGGDYSE PALRATNWEG
RFLVVGFAAG PIPKIPLNLA LLKGCQIVGV FWGAFTGREP KRHQENLKEL MSWFKAGKLR
PHVSRTYKFE EAAQALNDMA ARKVKGKIVI VPSR