| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1380 |
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| Symbol | |
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| ID | 5454857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1511501 |
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| End bp | 1512700 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876953 |
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| Product | radical SAM protein |
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| Protein accession | YP_001412657 |
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| Protein GI | 154251833 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCA TCGACATTGC GCATGAGAGG AAGACAGCCG CGACAGCGGG CGCTTCCGCG
CGGCCGCATC TTGCCGGGCT GACACGCCCG CTGCTCATGG ACGCGCTGAA GGCGTTCGGC
CTGCCGGACA ACCAGCTTCG CATGCGCGCC GGGCAGATCT GGAACGGGCT TTACAATCGC
GGCTTCACCG ATTTCGAGCG CATGACGACG CTGTCGAAGG AACTGCGCGG CAAGCTGGCG
GACGCCTTCG ACATTTCGCG GCTCGAAATC GTGACCGAAC AGAAATCTGT GGACGGCACG
CGGAAATGGC TGCTGCGGCT GCCGAGCGGC ATTCCCGGTG TGCCGGGCCC GGAAGTCGAG
ACGGTCTATA TTCCGGAAGA AGGACGCGGC ACGCTTTGCG TCTCCTCGCA GGTCGGCTGC
ACGCTCACCT GCACCTTCTG CCACACCGGC ACGCAGAAGC TGGTGCGCAA TCTCACCGCC
GGAGAAATCG TCGGGCAGAT ACTCCTTGCG CGCGACGCGC TGGGCGAATG GCCGGATGGC
GGGCGCAATT CCGAAGACCG CCTCATCACC AATATCGTGA TGATGGGCAT GGGGGAGCCG
CTCTACAATT TCGAGAATGT GCGCGACGCG CTGGAAGTCG TTTCCGACGG CGAGGGATTG
TCGCTGTCGA AGCGGCGCAT CACGCTGTCG ACATCGGGTG TTGTGCCGAT GATCGAACGC
GCGGGCGAGG AAATCGGCTG CATGCTCGCG ATCTCGCTTC ACGCCGTGGA CGACGAGACG
CGCAACAGAC TGGTGCCGCT CAACAAGAAA TATCCGATTG CCGAATTGCT GGAAGCCTGC
CGGAATTATC CCGGCGTCTC CAACGCGCGG CGCATCACAT TCGAGTATGT GATGCTGAAA
GGCGTGAACG ATTCGCTGGA AGACGCGAAG GCGCTGGTGC GGCTGTTGAA GCACATTCCG
GCGAAGATCA ACCTGATCCC CTTCAATCCC TGGCCGGGCT CGCCTTACGA ATGTTCCGAC
TGGGAACAGA TCGAGAAATT CGCCGACGTC GTCAATCGCG CCGGCTATGC AAGCCCTGTG
CGCACGCCGC GCGGCCGCGA CATCATGGCG GCCTGCGGAC AATTGAAAAG CGAGACGGTG
AAGGCGCGCG CGAGCGAGCG GTTCAAGGGC GAGAAGGCGG CGGCGCAACC GATCGCCTGA
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| Protein sequence | MASIDIAHER KTAATAGASA RPHLAGLTRP LLMDALKAFG LPDNQLRMRA GQIWNGLYNR
GFTDFERMTT LSKELRGKLA DAFDISRLEI VTEQKSVDGT RKWLLRLPSG IPGVPGPEVE
TVYIPEEGRG TLCVSSQVGC TLTCTFCHTG TQKLVRNLTA GEIVGQILLA RDALGEWPDG
GRNSEDRLIT NIVMMGMGEP LYNFENVRDA LEVVSDGEGL SLSKRRITLS TSGVVPMIER
AGEEIGCMLA ISLHAVDDET RNRLVPLNKK YPIAELLEAC RNYPGVSNAR RITFEYVMLK
GVNDSLEDAK ALVRLLKHIP AKINLIPFNP WPGSPYECSD WEQIEKFADV VNRAGYASPV
RTPRGRDIMA ACGQLKSETV KARASERFKG EKAAAQPIA
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