Gene Plav_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1378 
Symbol 
ID5456322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1510548 
End bp1511135 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content66% 
IMG OID640876951 
ProductDSBA oxidoreductase 
Protein accessionYP_001412655 
Protein GI154251831 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG AGTTCTGGTA CGAGTTCGCG AGCACCTATT CCTATCCGGC GGCGATGCGC 
GCCGCGCGCG AGGCCGGGGC GGCCGGGGTC GAGCTCGTCT GGCGGCCCTT CCTGCTCGGG
CCGATTTTCG GCGCGCAGGG CTGGAACGAC AGCCCCTTCA ACATCTATCC CGCCAAGGGC
CGCTACATGT GGCGCGACAT GGCGCGCATC TGCGAGGCGG AAGGGCTCAC GCTCGAAAAG
CCGGCGATCT TTCCGCAGAA CGGGCTCCGC GCCGCGCGGC TCGCCGTTCT CGGCACGGAT
GAGGACTGGA TGCCGGAATT CTCGCGCCGC GTCTATCTCG CGAATTTCGC CGAGGGAAAA
GACATTTCCG ACCGGGCGGT GCTGAGTGCG ATCCTCACCT CCCTCGATCT CGACGCGGCC
TCGCTCGTCG AAGCCGCAAA CGAGCAGGCC GCGAAGGACA AGCTGCGCGC GCAGAACGAG
GAAGCGGTCG CCAAGGGCAT TTTCGGCGCG CCGTCCTTCA TCGTCGGCGA TGAACTCTTC
TGGGGCAACG ACCGGATGGA AGAAGCCTTC GCCTGGGCGA AGCGATAG
 
Protein sequence
MKVEFWYEFA STYSYPAAMR AAREAGAAGV ELVWRPFLLG PIFGAQGWND SPFNIYPAKG 
RYMWRDMARI CEAEGLTLEK PAIFPQNGLR AARLAVLGTD EDWMPEFSRR VYLANFAEGK
DISDRAVLSA ILTSLDLDAA SLVEAANEQA AKDKLRAQNE EAVAKGIFGA PSFIVGDELF
WGNDRMEEAF AWAKR