| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1368 |
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| Symbol | |
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| ID | 5456652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1502044 |
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| End bp | 1502829 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876940 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001412645 |
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| Protein GI | 154251821 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGG AAAGAAAAGG CCGCGTAGAA GGCAAGATGG CGTTCGTCAC GGGCGGCGCG
CAGGGCCTCG GCAAGGCTTC CGCTATCATG CTCGCGCGCG AAGGCGCCAA GGTGACGCTC
GCCGACATCA ACGAAAAAGG CGCGCAAGCC GTCGCCGATG AAATCAATGC GAATTATCCG
GGCATGGCCT TCGCCGCCGG TCTCGATGTC ACACGCGAAG ACCACTGGAA GGATGCGCTT
GCCGAAGCGA ACAAGGCGAT GGGCGGCATC AATGTCCTCT TCAACAATGC CGGCATCGGC
GGCGGCACGA CGGTCGAGGA CACCGATTTC GAGACCTTCA AGAAGGTCCA GGCGGTCGAT
GTCGATTCCG TTTTTCTCGG CTGCAAATAT GCAATCCCCT ACATGGTGCC GCATGCGCCC
GGCTCGATCA TCAACACGTC CTCGATTGCG GGCTTGATCG CCGGCCACAA CATGGCCGCC
TACAACGCCG CCAAGGCGGG CGTCTGGCTG CTGTCGAAAT CCGTCGCCCT TCATTGCGCC
AAGCGCGGCT ACCGCATCCG CTCGAACTCG ATCCATCCGA CCTTCATCGA TACCCCCATC
CTTGACGGCA TGGCGCGTGG CATGTCGAAG GAGGAACTCG TCCGCAAGCT CGCCAAGCAG
GTGCCGCTCG GCGTCGTCGG CGATCCGGAT GACGTGGCCT ATTGCGTCCT TTATCTGGCA
TCCGACGAAT CGAAATTCAT CACCGGTTCC GAGATCAAGA TCGACGGCGG CATTAGCGCC
ATGTAA
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| Protein sequence | MTKERKGRVE GKMAFVTGGA QGLGKASAIM LAREGAKVTL ADINEKGAQA VADEINANYP
GMAFAAGLDV TREDHWKDAL AEANKAMGGI NVLFNNAGIG GGTTVEDTDF ETFKKVQAVD
VDSVFLGCKY AIPYMVPHAP GSIINTSSIA GLIAGHNMAA YNAAKAGVWL LSKSVALHCA
KRGYRIRSNS IHPTFIDTPI LDGMARGMSK EELVRKLAKQ VPLGVVGDPD DVAYCVLYLA
SDESKFITGS EIKIDGGISA M
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