Gene Plav_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1360 
Symbol 
ID5454940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1492110 
End bp1492565 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content60% 
IMG OID640876932 
Producthypothetical protein 
Protein accessionYP_001412637 
Protein GI154251813 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.399009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCG TCATTCGTCT CTTCCTTCTG GCCCTCGTGC TGCAAACCCC GTTTCTTGCG 
GCCCTCCATG CGGATGAGGT TCCCGGCGGC ATCCGGGTCA GCGATCCTTG GGCGAGGGCG
AGTGTCACCG CGAGCGGCGC CGCTTATTTC ACTATCGAAA ATTCCGGCAA TGAAGATGAT
ATACTTGTCG CCGTGCGCTC CGATGCCGCC GAAACAGTGG AAATGCACAC CATGACGATG
GACGGCATGG TGATGAAGAT GCGCAAGCTT TCCGAGCTGC CGGTGAAGGC GGGCGAGACG
GTGAAATTCG CACCCGGCGG GCTCCACATC ATGCTGATCC GGCTGAAAGA GCCGCTTCGC
GAAGGAATGT CGGTTTCGAT GACGCTTACC TTCGAGAAGG CCGGTGAAGT TCATGTCACG
GCCCCCGTTC AGGCGGCCGG TCACGGCGCG CATTGA
 
Protein sequence
MFAVIRLFLL ALVLQTPFLA ALHADEVPGG IRVSDPWARA SVTASGAAYF TIENSGNEDD 
ILVAVRSDAA ETVEMHTMTM DGMVMKMRKL SELPVKAGET VKFAPGGLHI MLIRLKEPLR
EGMSVSMTLT FEKAGEVHVT APVQAAGHGA H