| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1357 |
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| Symbol | |
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| ID | 5453750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1488486 |
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| End bp | 1489169 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876929 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001412634 |
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| Protein GI | 154251810 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.77249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.914113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGCT GGTCATCGAT TGCGCGAGCT TCATTGCCGG GCCTCTACCG GCGCGAGAAA
ACCGGCAAGG GCGGCGTGGT ATCGACTTCG CTTCTCGCCA ACGGGCTTTG GTCGAACAGT
GTCTGGATGC AGGCGGTTCT TTGCGATGCG GATTTTTCCG TGAGGCTGCG GCGCGGTCAG
CGCGGCGCAT TGACGGAGCT CTACAAATGC CGCGACGGAC GCTGGTTCAT GCTTGCCTTG
CTGAACTACG CGCGCGAATG GCCGCTGCTC GCGCACTGTA TCGGCCGTTC CGAATGGCTG
GACGATCCGC GATTCGCAAC GCCGGAGGCG CGCAAGGCGA ATGGGGCGGA GCTTGTAAAA
TTGCTGGAAG ATATATTCGT CACCGCCGAC TGGCAGCATT GGCGAGAATG CTTCGTGAGC
GCCGGCATTA CCTTCGGTCC GATCGCACAG CCAAGCGATC ATCTCGAATG CAGCCAGGTG
GCAGCCAACG GACTATTGCC CGAAATTGCC GGCACCAATG GCCTGCGCAC AGTCGGCAGC
CCCATCTCCA TCAAGGGTGA GAAGAAAACC GCGCCGCGCC CGGCGCCGGG CATCGGCGAG
CACACACGCA GCATCCTGGC GAGCTGCGGT TTCAGCGAAG AGGAAATCCG CGGCATGATC
GCAAGCGGCG CCGCCGCGGG GTAG
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| Protein sequence | MTCWSSIARA SLPGLYRREK TGKGGVVSTS LLANGLWSNS VWMQAVLCDA DFSVRLRRGQ
RGALTELYKC RDGRWFMLAL LNYAREWPLL AHCIGRSEWL DDPRFATPEA RKANGAELVK
LLEDIFVTAD WQHWRECFVS AGITFGPIAQ PSDHLECSQV AANGLLPEIA GTNGLRTVGS
PISIKGEKKT APRPAPGIGE HTRSILASCG FSEEEIRGMI ASGAAAG
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