| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1348 |
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| Symbol | |
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| ID | 5456543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1478982 |
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| End bp | 1480073 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876919 |
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| Product | metalloendopeptidase glycoprotease family |
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| Protein accession | YP_001412625 |
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| Protein GI | 154251801 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00956277 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTTCGCG TGAACCGACC CCTTACGATT CTCGGGATAG AGACAAGCTG CGACGAGACG
GCAGCGGCCG TGGTGCGCCG TCCGGCCGAT GGCGGGACCG GCGAAATACT CTCCAATATC
GTCTTTTCGC AGATCGAGGC GCATGCGCCT TTCGGCGGTG TTGTGCCGGA AATCGCGGCC
CGCGCCCATG TCGAGCATTT GGATGGGTTG ATTTCCCGCG CCCTCAAGGA GGCCCGTCTC
GATTGGGACG ACCTCGACGG GATTGCCGCC ACGGCGGGGC CCGGCCTTAT CGGCGGCGTG
ATCGTCGGGC TGATGACGGC GAAGGGCATC GCCGCCGCGC GGGGCCTGCC GCTGATCGCG
GTCAATCATC TTGAAGGTCA CGCCCTGACG GCGCGGATGA CGGATGCGCT GCCTTTTCCC
TATCTGCTGC TGCTCGTTTC CGGCGGCCAC AGCCAACTTC TCGTGGTGGA AGGCGTTGGC
CGCTACCGCC GTCTCGGCAC AACGATTGAC GATGCGGTGG GCGAAGCCTT CGACAAGGTC
GCGAAACTGC TCGGGCTTGG CTATCCCGGA GGACCGGCGC TGGAGCGGGC GGCGCTTGAG
GGCGATGCTT CCCGCTTCGC CCTGCCTCGG CCTCTCATCA ACCGGCCGGG CTGCGACTTT
TCCTTTTCCG GCTTGAAGAC CGCCGTAAGG CAGCTCGCGG AAGGCCTGGG CAGACCGGAC
GACAAGGACA AGGCGGACAT TGCGGCATCG TTTCAATGCG CGGTCGCGGA CGTACTTGCG
AGCCGCACCG AAAATGCGAT GGCGGTAGCG AACGAGATGA TCCGCCCTGG CCATCGCCGC
CTCGTAGTGG CCGGCGGCGT TGCCGCGAAC ATGATGCTGC GGGAGCGGCT GACAGTCTCG
GCTCACGCGT TCGGCTATGA ATTTGTTGTA CCGCCCCTGA AACTCTGCAC GGATAATGGC
GCGATGATTG CCTGGGCGGG CGCCGAAAGG CTGGCGCTCG GGCTGACCGA TCCGATCGGC
ACGGGGCCCC GGGCCCGCTG GCCGCTCGAT GCCGACGCGA CGCCCGCTCG CGGAGCCGGC
GTGAAAGCCT GA
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| Protein sequence | MFRVNRPLTI LGIETSCDET AAAVVRRPAD GGTGEILSNI VFSQIEAHAP FGGVVPEIAA
RAHVEHLDGL ISRALKEARL DWDDLDGIAA TAGPGLIGGV IVGLMTAKGI AAARGLPLIA
VNHLEGHALT ARMTDALPFP YLLLLVSGGH SQLLVVEGVG RYRRLGTTID DAVGEAFDKV
AKLLGLGYPG GPALERAALE GDASRFALPR PLINRPGCDF SFSGLKTAVR QLAEGLGRPD
DKDKADIAAS FQCAVADVLA SRTENAMAVA NEMIRPGHRR LVVAGGVAAN MMLRERLTVS
AHAFGYEFVV PPLKLCTDNG AMIAWAGAER LALGLTDPIG TGPRARWPLD ADATPARGAG
VKA
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