Gene Plav_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1342 
Symbol 
ID5455838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1475345 
End bp1475629 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content60% 
IMG OID640876913 
ProductYCII-related 
Protein accessionYP_001412619 
Protein GI154251795 
COG category[S] Function unknown 
COG ID[COG2350] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0000378288 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCTTCT GCCTTATCTG CACCGACAAG CCGAACGCCC TCGAACTCAG GCTCGCGAAC 
CGCGACGCGC ATCTGAAATA CTGGGGCGAA GCGGGTTGCG TGAAAATCGG CGGGCCCTTC
ACCAATGACG ATGCGAGCGT GATGAACGGC TCGATGCTGG TGATCGACGT GGCCGACCGC
GCCACCGCCG AGAAACTTGT CGAGAACGAT CCCTACAACA AGGCAGGGCT CTTCGCGCAG
ACGGAAGTTC GCGCGTGGAA ATGGCTTCTC GGACCGAAGG AATAG
 
Protein sequence
MLFCLICTDK PNALELRLAN RDAHLKYWGE AGCVKIGGPF TNDDASVMNG SMLVIDVADR 
ATAEKLVEND PYNKAGLFAQ TEVRAWKWLL GPKE