Gene Plav_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1341 
Symbol 
ID5454044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1474914 
End bp1475339 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content57% 
IMG OID640876912 
Producthypothetical protein 
Protein accessionYP_001412618 
Protein GI154251794 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0000414601 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTATT GGCTTTTCAA GTCCGAACCG TCGACATGGT CGTGGGACGA CCAGAAGAAA 
AAGGGCGCCA AGGGCGAACC CTGGAACGGC GTTCGCAACT ACCAGGCGAA CAACAACATG
AAGGCGATGA AGAAGGGCGA TCTCGGCTTC TTTTATCATT CGGTGGATGA GAAGAGCATT
GTCGGCATCG TTCGCGTGAT CGGCGAGCAC CGGCCCGACC CGACAGACGA GAAGGGAAAG
TTCGGTCTTG TCGTGATCGA AGCTGTCGAG GACATGCCGA AACCCGTTAC GCTTGACGAT
GTGAAGAAGG AGCCGGCACT TCACGACATG GTGCTGGCGA ATAATTCGCG CCTCTCCGTC
CAGCCCGTGC GAGACGAGGA ATGGAAGCTC GTCTGCAAGA TGGGCGGCCT GAAGAAAGCG
CCGTGA
 
Protein sequence
MAYWLFKSEP STWSWDDQKK KGAKGEPWNG VRNYQANNNM KAMKKGDLGF FYHSVDEKSI 
VGIVRVIGEH RPDPTDEKGK FGLVVIEAVE DMPKPVTLDD VKKEPALHDM VLANNSRLSV
QPVRDEEWKL VCKMGGLKKA P