| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1338 |
|---|
| Symbol | |
|---|
| ID | 5455179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1473429 |
|---|
| End bp | 1473803 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640876909 |
|---|
| Product | death-on-curing family protein |
|---|
| Protein accession | YP_001412615 |
|---|
| Protein GI | 154251791 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3654] Prophage maintenance system killer protein |
|---|
| TIGRFAM ID | [TIGR01550] death-on-curing family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0000472894 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATT ATCTGACGCT GACGGAGGTT CTCGTAATTC ACGAGGAACT GATCGATCTC
TATGGCGGCG CGCATGGCGT GCGTGACATG GGAGCGGTTG AGTCCGCGCT CTTTCGTCCG
CAAACGGGCT ACTACGAAGA CGTGATCGCG GAAGCGGCGG CGCTGCTCGA AAGCCTCGCC
ATCAATCATC CCTTCATCGA CGGCAACAAG CGCATTGCTT TTGCCGTCGC GGACGTCTTC
CTGCGGCTCA ACGGATATCT CTTCGAGGAA GACCCCGTCG CCGCCTACGA TTTCATGATC
GGCCTTTTCG AGCGCGGTGA ATTCCGGTTC GAGAAACTGG AGCCGTGGTT GAGGGAGAAG
GTGCGGGCGC TCTAG
|
|---|
| Protein sequence | MPDYLTLTEV LVIHEELIDL YGGAHGVRDM GAVESALFRP QTGYYEDVIA EAAALLESLA
INHPFIDGNK RIAFAVADVF LRLNGYLFEE DPVAAYDFMI GLFERGEFRF EKLEPWLREK
VRAL
|
|---|
| |