| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1334 |
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| Symbol | |
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| ID | 5456111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1469903 |
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| End bp | 1471168 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876905 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001412611 |
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| Protein GI | 154251787 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00000214497 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCGAAC AGAAGAACAA GCAACTCGAA ACCGAGAACA AGGGCCCGCT CAAGGGCGTG
CGCATCGTCG ATCTCACCGC CGTCGTCTTC GGCGCCTATG CGACGCAGAT CCTGGGCGAC
ATGGGCGCCG ACGTCATCAA GGTCGAAGCG CCCTCGCCGA CCGGCGGCGG CGGACAAGGC
GGCGACATCA TGCGCTGGCC GGGCCACCTG CCGGAAGGCG CGGCGGCGGA CCTCGGCCCG
ATCTTCATGA CCATCAACCG CAACAAACGC TCGGTGCTGC TCGACCTCGG CAAGGCGGAA
GGCCGCGAGG CGCTGCTGAA GATCGTCGCG ACGGCGGACG TACTCACATC CAACATCCGC
TATGCGGCGA TGAAGAAGCT GGGCTTGTCG TATGAAGATG TGAAGGCGGT GAAGCCCGAC
ATTATTTTCG TGCATGCGGC GGGCTATGGC TCGGACGGGC CTTATGCCGG ATTGCCGGCC
TATGACGATC TCATTCAGGC GGGCTCCGGC GCGGCGGACC TTCTCGGCCG CATGGATGGC
GACCCGAAGC CGCGCTATAT CCCGACCATC ATGGCGGACA AGGTGTCCGG ATTGTTCATG
GTGCAGGCGG TGACGGCGGC GCTCTTCCAC AAGGAGCGGA CCGGCGAGGG ACAATTCGTC
GAAGTGCCGA TGCTCGAAGC CGTCACCTCC TTCGTGCTTG CCGAACATTT CTACGATCAC
GTCTATGACC CGCCGACCGG GCAATGGACC TATGGCCGCA TCACCAACCC GGACCGCCGC
CCCTATCGCA CCAAGGACGG GCATATCGGC CTCCTTCCTT ATTCCGACAA GCAGTGGGAA
CAGTTTTTCG AACTGGCGGG GCGGCTCGAC GATTACAAGA GCGATCCGCG CTTCAACAAT
TACAAGGCGC GCACGATCCA TATCCGCGAC CTCTATGCGA TGATCGAGGA GACGACGGAG
ACGAAGACGA CGGAGGAATG GCTGGCGCTC TTGAAGCCTT TGTCGATCCC TGCCGTGAAG
ATGAACCGGC TGGACGATCT GCAGGACGAT CCGCATCTGA AGGCCGTCGA TTTCTTCGCC
CGCTACGACC ATCCGCATGC CGGACCCTAT TTCGCGCTGA AGCCGCCGGT GCGCTTCATG
GCCTCGCCGT CGAGCATCCG CAGGCATCCG CCGCGCCTCG GCGAGCAGAC GGCGGAAGTG
CTGCGCGAAG CGGGCATGAG CGAGGCGGAG ATCGCGCGGC TCGCGGGCGA CGCGGAGAAG
GTGTGA
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| Protein sequence | MSEQKNKQLE TENKGPLKGV RIVDLTAVVF GAYATQILGD MGADVIKVEA PSPTGGGGQG
GDIMRWPGHL PEGAAADLGP IFMTINRNKR SVLLDLGKAE GREALLKIVA TADVLTSNIR
YAAMKKLGLS YEDVKAVKPD IIFVHAAGYG SDGPYAGLPA YDDLIQAGSG AADLLGRMDG
DPKPRYIPTI MADKVSGLFM VQAVTAALFH KERTGEGQFV EVPMLEAVTS FVLAEHFYDH
VYDPPTGQWT YGRITNPDRR PYRTKDGHIG LLPYSDKQWE QFFELAGRLD DYKSDPRFNN
YKARTIHIRD LYAMIEETTE TKTTEEWLAL LKPLSIPAVK MNRLDDLQDD PHLKAVDFFA
RYDHPHAGPY FALKPPVRFM ASPSSIRRHP PRLGEQTAEV LREAGMSEAE IARLAGDAEK
V
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