| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1329 |
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| Symbol | |
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| ID | 5455854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1464775 |
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| End bp | 1465509 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876900 |
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| Product | extensin family protein |
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| Protein accession | YP_001412606 |
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| Protein GI | 154251782 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000000000197088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAACGAGA GATTTTCGCC CCGCGCCCGC CGCCTGCTCG CCGTCGCCGG TATCGCTCTC
CGCTTCGTCC TTTTCGTCGG CGGCCTCGTC GCCGCCGGCT GGTTCGCCTT CATCTATTTT
CCCGATGCCT ATAATCCCTT CGTGCCGCCG GACCTGCGCG AGGAGCCGAA CATCGTCACG
CCGCTCAAGC TCAAGGGCCT CGAGGGCGAA TACGACATCT GCATGTCGGT CGTCCGGGCG
TCGGGCGCCA AGGCGCGGCG CGACAGCATT TCCTCCCCGT CGGAAGGCTG CGGCATGCCG
CAGGGCCTCT ATCTCCAGCA ATCGCAGATC TCTTATGGGG GTGGCATCCG CCTCACCTGC
CCGGCCACGG CGGCGCTTCT CATGTGGGAG CGTCATGTCG TGGCGAAGGC AGCCGAAGCC
CATTTCGGTT CGGAGGTGAC GCGCGTCCGC CATTTCGGCA CCTATGCCTG CCGCAATGTG
AACAATGCCG TGTCGGGCCG CCGCAGCGGC CATGCCGCCG CCAATGCCAT CGACATAGCG
GGCTTCGATC TCGCAAACGG CAAAAGCGTC TCGGTCGAGC GCGACTGGGG CAAGGACAGT
CCCGAAGGCC GCTTCCTCAC GGAGGTCCAT GACGGCGCCT GCGGCCTCTT CTCCACCGTC
CTCGGCCCTG AATACAACGC CCTCCACGGC AATCACTTCC ACTTCGAAAT GACGCGGTGG
GGGATGTGCC GGTGA
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| Protein sequence | MNERFSPRAR RLLAVAGIAL RFVLFVGGLV AAGWFAFIYF PDAYNPFVPP DLREEPNIVT
PLKLKGLEGE YDICMSVVRA SGAKARRDSI SSPSEGCGMP QGLYLQQSQI SYGGGIRLTC
PATAALLMWE RHVVAKAAEA HFGSEVTRVR HFGTYACRNV NNAVSGRRSG HAAANAIDIA
GFDLANGKSV SVERDWGKDS PEGRFLTEVH DGACGLFSTV LGPEYNALHG NHFHFEMTRW
GMCR
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