Gene Plav_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1325 
Symbol 
ID5456687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1461382 
End bp1462104 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID640876896 
Productmethyltransferase type 12 
Protein accessionYP_001412602 
Protein GI154251778 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000000000858625 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCCG AAATTTGCAT TGTCTGCGAC GGCGAGATTT TCGAGCCGGC CGGCACTCAC 
AGCGGCTATT CGCTTTTTCA TTGCCTGCAA TGCGGACTGC GTTTCACCCA CCCGATACCC
GGCGCAGCCG AGATCGCGGC GATCTACACG GAGTACGGCA CCAACCGGAG CTACGCGGCC
AAGGCGGAAC GCAAGATCCG GCGTTCGATG AAACGCATTC GCCGCTACAT GAACCGGGGC
CCGGGCAAAC GCTTCCTCGA TGTCGGCTGC AATGTCGGCA CGGCGGTGGA GGCGGCGCGG
CGGCTTGGGC TCGACGCCCA TGGTATCGAT ATCGGCGACC AGAGCATTGA GATCGCAAGG
GAGATGTTTC CCGGCGGACA TTTCCACGCG GGGCCGATAG AGAGCCTGCC CCCGGAATGG
GGCCAGTTCG ATTTCGTTTA TTCAGCGGAG GTGATCGAGC ATCTGCCGGA CGCGAATGCC
TATTTCAATG CACTCAGCCT ACGGATCAAA CCGGGCGGGC TTCTCTTCCT GACGACTCCG
GATGCCGGGC ACTGGCGCGT ACCGTCGGAA TTCACCAAGT GGGACCAGGT GTTCCCTCCA
CACCACCTCC TCTATTTCAC AAAAGACGCG ATGCGCCGCT TTCTCGATCG CCACGGCCTT
GAGGTGGTCA AGTTCGAATG GAAATTGAAG CCCGGTCTGC ACGCGATTGC CCGCAGACGG
TAA
 
Protein sequence
MNPEICIVCD GEIFEPAGTH SGYSLFHCLQ CGLRFTHPIP GAAEIAAIYT EYGTNRSYAA 
KAERKIRRSM KRIRRYMNRG PGKRFLDVGC NVGTAVEAAR RLGLDAHGID IGDQSIEIAR
EMFPGGHFHA GPIESLPPEW GQFDFVYSAE VIEHLPDANA YFNALSLRIK PGGLLFLTTP
DAGHWRVPSE FTKWDQVFPP HHLLYFTKDA MRRFLDRHGL EVVKFEWKLK PGLHAIARRR