Gene Plav_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1324 
Symbol 
ID5456673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1460399 
End bp1461145 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID640876895 
Productmethyltransferase type 11 
Protein accessionYP_001412601 
Protein GI154251777 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.386033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000000000822833 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGGCA CAAGCAACGC CATGATTGCG CCTGCATCCT GCATCGTCTG CGGGACACAC 
GACTTTGCGC CGCTCGGCAC CAAGGGCAGA TACAATCTTT TTCGCTGCCG CGCCTGCAGA
CTGGCCTTTG TGCATCCGAT GCCCTGCACC TCGGAAATAG CCGCGATCTA CGAAAAATAT
ACATTGCACG ACAGCTATGA ACGCCGCGCG CGCCGCAAGA TCATCCGCTC CACGCGGCGT
CTGCGCCGAT ATATGCACCT GTCCCCCGGC AACCGCTTTC TCGACATGGG CTGCAGCATC
GGCACCGGCG TCGAAGCGGC AAAGCGCCTC GGTTTCGAGG CGCATGGCAT CGACATCGAC
GAGGACAGCG TCGGCACAGC GCGAAGATTG TTCCCGGACG GACGATATCA CGCGGGCACG
ATCGACAGCC TGCCGGCGGA ATGGGGACAA TTCGATTTTC TGTTTTCGGT GGAAGTGATC
GAGCACCTGC CCGACCCGCA TGCCTATTTC GAGGCGCTGG CGCCGCGCGC GCGAAGCGGA
GCATTGCTCT ATCTGACGAC GCCGGACGCA GGCCATTGGC GCGTGCCGAA AGATTTTCCC
AGCTGGCACC ATGTTTGCCC GCCGCAGCAT CTTCTGTTCT TCAACAAGCA CGCCATAGGA
CGGTTTCTCG ACCGGCACGG CTTCGATGTC GTGAAGTTCG AATGGAACCT GAAGCCGGGA
ATGAAGCTTC TCGCGAGAAA ACGCTGA
 
Protein sequence
MAGTSNAMIA PASCIVCGTH DFAPLGTKGR YNLFRCRACR LAFVHPMPCT SEIAAIYEKY 
TLHDSYERRA RRKIIRSTRR LRRYMHLSPG NRFLDMGCSI GTGVEAAKRL GFEAHGIDID
EDSVGTARRL FPDGRYHAGT IDSLPAEWGQ FDFLFSVEVI EHLPDPHAYF EALAPRARSG
ALLYLTTPDA GHWRVPKDFP SWHHVCPPQH LLFFNKHAIG RFLDRHGFDV VKFEWNLKPG
MKLLARKR