| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1320 |
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| Symbol | |
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| ID | 5456472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1456489 |
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| End bp | 1456884 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876891 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001412597 |
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| Protein GI | 154251773 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.0888357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000000634959 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGACATCT CCTATCTCCC CTTCGCCAAC CTTCTCGGGA TCGAAATTGT CGAGGCAAAA
CCGGAGCTTG TGGTGGCGAG GCTCGCCGTC CGCAAGGAGC TTTGCACCAT CCCGGACATC
CTGCATGGCG GCGCCATCAT GTCCTTCGCC GATACGGTGG GGGCGGTTGC GACCGTCCTC
AACCTCCCCG AAGGCGCCTC CACCACGACC GTCGAGAGCA AGACCAATTT CCTCGCCCCT
GTGCCGCTCG GCGACACCGC CATCGCCACC TGCGAGGCCT TCCACAAGGG CGGAAGGCTG
ATGGTCTGGC AGACGAAAAT CACCAGAAAC GACGGCCGCC TCTGCGCCGT CGTCACGCAG
AGCCAGATGG TGCTGAAGCC CGAGAAGAAG GGCTAG
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| Protein sequence | MDISYLPFAN LLGIEIVEAK PELVVARLAV RKELCTIPDI LHGGAIMSFA DTVGAVATVL
NLPEGASTTT VESKTNFLAP VPLGDTAIAT CEAFHKGGRL MVWQTKITRN DGRLCAVVTQ
SQMVLKPEKK G
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