| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1319 |
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| Symbol | |
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| ID | 5456027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1454690 |
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| End bp | 1456303 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876890 |
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| Product | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_001412596 |
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| Protein GI | 154251772 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0707247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.000000467197 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTCCT CCAAATCCCA CCCCGAAGCC GCCGATATCC AGCGCGTCCG CCGCGCCCTC
CTCTCCGTCT CCGACAAGAC CGGGCTGATC GACTTTGCCC GCGCGCTGCA CGGGGCGGGC
GTTGAGCTGA TCTCGACCGG CGGCACGGCG AAGGCGATCA AGGACGCGGC GCTGCCGGTG
AAGGACGTGG CGGACCTGAC GGGCTTTCCC GAGATGATGG ACGGGCGCGT GAAGACGCTG
CACCCGAAGG TACATGGCGG GTTGCTGGCG GTGCGCGACG ACGCGGAGCA CGCCGCCGCG
ATGAAGGAAC ACGGGATCGC GGGCATCGAC CTTCTCTGCG TCAATCTCTA TCCCTTCGAG
GCGACGGTAG CGAAGGGTGC GGCTTACGAC GAATGCGTCG AGAATATCGA CATTGGCGGC
CCGGCCATGA TCCGCGCGGC GGCGAAGAAC CATGCCTATG TCGGCGTGAT CGTGGACGGC
GCGGACTATG CCGCCGTGAT CGAGGAAATC ACCGGCAAGG GCGGCACCTC GCTCGTGCTC
AGGAAACGCC TCGCGCAGAA GGCCTATGCG CGGACGGCGG CTTACGACGC GGCGATCTCC
AACTGGTTCG CGAATGCCAT CGGCGAGACG GCACCCGACT ACCGCGCCTT TGGCGGCTCG
CTGAAACAGA CGCTCCGCTA TGGCGAGAAC CCGCATCAGG TGGCGAGCTT CTATGTGACG
GGCGAGAACC GCCCCGGCGT GTCGAATGCC GAACAGTTGC AGGGCAAGGA GCTTTCCTAC
AACAACATCA ACGACACGGA TGCGGCCTTC GAACTGGTCG GCGAATTCGA CCCCAAGCTC
GCGCCCGCCA TCGCGATCAT CAAGCACGCG AACCCTTGCG GCGTCGCGAC CGGTGCGACG
CTGGCCGACG CCTACCGCAA GGCCCTGGCC TGCGACCCTG TTTCGGCCTT TGGCGGCATC
ATCGCCGCGA ACCGGCCGCT TGACGGCGAG ACGGCGGAAG AAATCGCGCG CATCTTCACC
GAAGTGATCA TCGCGCCGGA AGCGGACGAG GACGCACGCC GCATCATCGG CGCGAAGAAG
AACCTCCGCC TGCTGATTAC CCACGGACTG CCCGACCCCG CCACAGCCGG CCTCTTCTAC
AAATCGGTCG CGGGCGGGCT GCTCGTCCAG TCGCGCGACA ATGGCCGCGT CGACACGCTC
GACCTCAAGG TGGTGACGAA GCGCGCGCCG ACGGCGCAGG AAATGGAAGA CCTCAAATTC
GCCTTCCGCG TCTGCAAGCA TGTGAAGTCG AACGCGATCA TCTATGTGAA GAATGGCGCC
ACCGTCGGCA TCGGCGCGGG CCAGATGAGC CGCGTGGACT CAGCGCGCAT CGCGGCACGC
AAGGCGCAGG ATGCGGCGGA GGCGGCCGGC GAAAAGACGC CCGCCACCAT TGGCTCCGTC
GTCGCGTCCG ACGCCTTCTT CCCCTTCGCC GACGGACTTC TTTCGGCGGC GGAAGCAGGC
GCGACGGCTG TCATTCAGCC GGGCGGCTCG GTGCGCGACG ACGAGGTGAT CGCGGCGGCG
GACGAAAAGG GCCTCGCCAT GGTGATGACG GGGATGCGCC ACTTCCGCCA CTGA
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| Protein sequence | MTSSKSHPEA ADIQRVRRAL LSVSDKTGLI DFARALHGAG VELISTGGTA KAIKDAALPV
KDVADLTGFP EMMDGRVKTL HPKVHGGLLA VRDDAEHAAA MKEHGIAGID LLCVNLYPFE
ATVAKGAAYD ECVENIDIGG PAMIRAAAKN HAYVGVIVDG ADYAAVIEEI TGKGGTSLVL
RKRLAQKAYA RTAAYDAAIS NWFANAIGET APDYRAFGGS LKQTLRYGEN PHQVASFYVT
GENRPGVSNA EQLQGKELSY NNINDTDAAF ELVGEFDPKL APAIAIIKHA NPCGVATGAT
LADAYRKALA CDPVSAFGGI IAANRPLDGE TAEEIARIFT EVIIAPEADE DARRIIGAKK
NLRLLITHGL PDPATAGLFY KSVAGGLLVQ SRDNGRVDTL DLKVVTKRAP TAQEMEDLKF
AFRVCKHVKS NAIIYVKNGA TVGIGAGQMS RVDSARIAAR KAQDAAEAAG EKTPATIGSV
VASDAFFPFA DGLLSAAEAG ATAVIQPGGS VRDDEVIAAA DEKGLAMVMT GMRHFRH
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