| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1312 |
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| Symbol | |
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| ID | 5453983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1448094 |
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| End bp | 1449002 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876882 |
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| Product | thioredoxin |
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| Protein accession | YP_001412589 |
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| Protein GI | 154251765 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.968155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00158392 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACCGA TTATCGGAAA CGACGCCGCC CTCGGCGCGG ACGACCTCAT CGTCGATACG
ACGACGCAGA CCTTTGCGCG CGACGTGATC GAAGCCTCGC GCGATGTGCC CGTTATCGTC
GATTTCTGGG CGCCCTGGTG CGGCCCCTGC AAGCAGCTCA CCCCCGTGCT GGAAAACGCG
GTGCGGGCGG CGCGGGGCGC GGTGAAGCTC GTGAAGATGA ACATCGACGA CCACCCGGCG
GTCGCGCAGC AACTCCGCAT CCAGTCGATC CCGGCGGTCT ATGCCTTCAG GAACGGCCAG
CCGGTGGACG GCTTCATGGG CGCGCTGCCC GAAAGCCAGA TCAAGGCTTT CATCGCGCGG
CTTGCGGGCG ATGTCGGACC CTCGCCTGCC GAGGAACTGA TCGAGATCGG CCGCGAAGCG
CGCGAGGCGG GCGACCTGTC GCAGGCCGCG CAGGCTTTCG CGCAGGCCGC GCAGGAAGAG
CCGGGCAACC CTGCCGCCGT CGCGGGGCTC GCGCGTTGCT ACATCGAGGC GGGCGATCTC
GACCGCGCGA AGCAGACGCT GGCGCTCGTT CGCCCCGACG CCCGCAACGA CCCGGAAATT
GCCGCCGCCG AAGCAGCACT TTCGCTGGCG GAGAAGGCGG GCGACCTCGG CGATGTCGGC
GAATTGCAGG CGAAGGTCGA GGCCAATCCG AAAGACCACC AGGCACGCTT CGACCTCGCG
CTCGCACTCA ATGCGCGCGG CGACAAGGAA GGCGCGCTCG ACCAGCTTCT CATCAGCATC
GAATATGACC GCAACTGGAA CGACCAGGCA GCCCGCAAGC AACTCGTCGA GTTTTTCGAC
GCTTACGGCC CCAAGGACGA AGCGACGCTG AGCGGCAGGC GCCGGCTGTC GTCGATCCTG
TTCAGTTGA
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| Protein sequence | MEPIIGNDAA LGADDLIVDT TTQTFARDVI EASRDVPVIV DFWAPWCGPC KQLTPVLENA
VRAARGAVKL VKMNIDDHPA VAQQLRIQSI PAVYAFRNGQ PVDGFMGALP ESQIKAFIAR
LAGDVGPSPA EELIEIGREA REAGDLSQAA QAFAQAAQEE PGNPAAVAGL ARCYIEAGDL
DRAKQTLALV RPDARNDPEI AAAEAALSLA EKAGDLGDVG ELQAKVEANP KDHQARFDLA
LALNARGDKE GALDQLLISI EYDRNWNDQA ARKQLVEFFD AYGPKDEATL SGRRRLSSIL
FS
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