Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1309 |
Symbol | |
ID | 5455850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1446809 |
End bp | 1447177 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640876879 |
Product | hypothetical protein |
Protein accession | YP_001412586 |
Protein GI | 154251762 |
COG category | [S] Function unknown |
COG ID | [COG3536] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.159335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.00415423 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGACG CGGGCGCCGC GCCCTGGCCG ACCGGCATCA AGCTGAAAAA GGCCGAGCGC ATTCTCGAAA TCGCATTCGA TGACGGCGTG AGCTTCGCGC TGCCCGCCGA ATTGCTGCGC GTGGAAAGCC CTTCCGCCGA GGTGCAGGGG CATGGCGGCG CGCAGAAGAA GACCGTGCCC GGCAAGGCCA ATGTCGCCAT CGTGACGCTC GAGCCTGTCG GCAATTACGC GGTGAGGATC GTCTTCGACG ATGGCCACGA CACCGGCCTC TATACTTGGG AGACGCTCTA CCGGCTGGGC CGGGACAGCG AGAAAATCTG GACAGACTAC ATCACGGCGC TGGAGCGGCA GGGGCTGAGC CGGGACTAA
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Protein sequence | MSDAGAAPWP TGIKLKKAER ILEIAFDDGV SFALPAELLR VESPSAEVQG HGGAQKKTVP GKANVAIVTL EPVGNYAVRI VFDDGHDTGL YTWETLYRLG RDSEKIWTDY ITALERQGLS RD
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