Gene Plav_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1309 
Symbol 
ID5455850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1446809 
End bp1447177 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID640876879 
Producthypothetical protein 
Protein accessionYP_001412586 
Protein GI154251762 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.159335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.00415423 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGACG CGGGCGCCGC GCCCTGGCCG ACCGGCATCA AGCTGAAAAA GGCCGAGCGC 
ATTCTCGAAA TCGCATTCGA TGACGGCGTG AGCTTCGCGC TGCCCGCCGA ATTGCTGCGC
GTGGAAAGCC CTTCCGCCGA GGTGCAGGGG CATGGCGGCG CGCAGAAGAA GACCGTGCCC
GGCAAGGCCA ATGTCGCCAT CGTGACGCTC GAGCCTGTCG GCAATTACGC GGTGAGGATC
GTCTTCGACG ATGGCCACGA CACCGGCCTC TATACTTGGG AGACGCTCTA CCGGCTGGGC
CGGGACAGCG AGAAAATCTG GACAGACTAC ATCACGGCGC TGGAGCGGCA GGGGCTGAGC
CGGGACTAA
 
Protein sequence
MSDAGAAPWP TGIKLKKAER ILEIAFDDGV SFALPAELLR VESPSAEVQG HGGAQKKTVP 
GKANVAIVTL EPVGNYAVRI VFDDGHDTGL YTWETLYRLG RDSEKIWTDY ITALERQGLS
RD