| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1307 |
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| Symbol | |
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| ID | 5455460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1444132 |
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| End bp | 1445487 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640876877 |
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| Product | amidase |
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| Protein accession | YP_001412584 |
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| Protein GI | 154251760 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.256465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0218036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG GCAACATGAC GGCGCGGGCG CTGGGCGACC TTTTTGAGCG GGGGGAGGCC
GATCCGCGCG ACGCGACGGA AGATTTTCTC GCCCGCGCGG CGGCGGCGGA CCCGGACCAT
CGCATCTATG TGCGCCTGCT TGAGAAACGC GCCCGGGCCG AGGCGGCCGC GGCGGCGGAC
CGGGCGAAGC GGGGCCTGCG CCGCCACGCG CTGGACGGTG TGCCGCTTTC ATGGAAGGAC
CTCTTCGACA CTGCGGGCGC GGCGACGGCG GCAGGCTCAC TGCCGCTGAA AGACCGGGTG
CCTGCGCGCG ATGCCGAAGT GCTGGCGCGA GCGACCCGGG CGGGCGCCGT CTGCCTCGGC
AAGACGACGA TGACCGAGAT CGCCTTTTCA GGCCTCGGCA TCAACCCGAA ATTCGGCACG
CCGGCCAATG CATGCGACGA GAAGATCGAG CGCGTGCCGG GTGGCTCGTC GGCGGGTGCC
GCGGTTTCGG TCGCGCGGGA TCTGGCGGCG GGCGCCATCG GCACCGACAC TGGCGGCTCG
GTGCGCATTC CCGCCGCGTG GAACGGGCTG GTCGGGCTGA AAACGACAAG CGGATCTCTG
CCCCTCACCG GCACCGTGCC GCTATCGCCG ACATTCGACA CGGTAGGGCC GCTCGCAAAG
GACGTGGAAG ACGCCGCGGC GATGTTCGCC TTGCTTGAAG GGAAACAGGC GCGCGCCATC
GAGCCCTTCG ATCTCTCCCG CGCGGTTTTC ATGCTTCCGG GTGGCATTGG CTGGTCGGAA
CTGGAAGAGG GCGTCGCCGC CGCGCTTGAA GGTGCGATCC GCCGCCTCGT TCATGCCGGC
GCCAGAATAG TCGAACATCC GCTCCCCGAG CTCGACGAGG TGCACAGGCT TGCCTGGGAC
CCGAAAGGGA GCCGTCTCGT CGCCGATGCC TATGCGCAAT GGGGCGAGAT GCTCCAAGCC
AACGCGAACG ACATTTATCA GCCCGTCCGC GACCGCGTGA TGGCGGGCGA AAGGCTGATG
GCAGGCGACA TCATCCGGGC GGATATGGAG CGCGCCGATA TTCGCGCGCG CTACCTCGCG
GCGACGGCGG GTGCCGATGC AGTGCTGATG CCGACAGTGG CGATTTCACC GCCGCCGATC
GCGGCATTGA TCGATGGCGG CGAGGCCTAT GGCAAGGCGA ACCGCATGGC GCTCCGCAAC
ACGACGATGG GAAACCAGCT CGGGCTTTGC GCGATGACGC TTCCTGCCGG CTATGACGGG
CAAGGACTGC CGGTTGGTCT GATGCTACAG GCTGCTCCGT TCACGGAGGA AAAGCTGCTC
CGTGTCGGTC GTGCCGTGGA AAAGGCTCTG CACTAG
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| Protein sequence | MDFGNMTARA LGDLFERGEA DPRDATEDFL ARAAAADPDH RIYVRLLEKR ARAEAAAAAD
RAKRGLRRHA LDGVPLSWKD LFDTAGAATA AGSLPLKDRV PARDAEVLAR ATRAGAVCLG
KTTMTEIAFS GLGINPKFGT PANACDEKIE RVPGGSSAGA AVSVARDLAA GAIGTDTGGS
VRIPAAWNGL VGLKTTSGSL PLTGTVPLSP TFDTVGPLAK DVEDAAAMFA LLEGKQARAI
EPFDLSRAVF MLPGGIGWSE LEEGVAAALE GAIRRLVHAG ARIVEHPLPE LDEVHRLAWD
PKGSRLVADA YAQWGEMLQA NANDIYQPVR DRVMAGERLM AGDIIRADME RADIRARYLA
ATAGADAVLM PTVAISPPPI AALIDGGEAY GKANRMALRN TTMGNQLGLC AMTLPAGYDG
QGLPVGLMLQ AAPFTEEKLL RVGRAVEKAL H
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