| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1306 |
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| Symbol | |
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| ID | 5454995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1441861 |
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| End bp | 1444077 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876876 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001412583 |
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| Protein GI | 154251759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0575142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATC TAGGGAAAAT GTGGCCCGTT GCGGTTAATG CAGCGGCGGG GCTGGTACTG
GCCGGATTTA TCGGCTGGCA ATTCGTGGGC GGTGGCGAGG ATGAGCAGGT GGCGGAAGCG
CCGCCGGCGG TCGAAGCGCC CGCAGCTTCG GCGCCCATCG AGGCCGACAG GATCGAAGGC
GCCGTCGGGG TCGATGCGGA GCGCATCATC AATGCGGACA AGGAGCCCGG CAACTGGCTC
GCCCATGGCC GCACCTATGA TGAGCAGCGT TTCTCGCCGC TCGACCAGAT CACGCCTGAA
AATATCGGCC AGCTCTCGCT CGCCTGGGCT CTCGACACCG ACACGGCGCG CGGCCTCGAG
GCGACGCCGA TCGTCGTCGA CGGCACCATG TACATGTCGC TCATCTGGGG CATCACAATC
GCGGTCGATG CGAAATCGGG CGAAGAGCTC TGGCGCTTCG ATCCGGAAGT ACCCGGCGAA
TGGGGCCGCT ATGGCTGTTG CGACGTGGTC AATCGCGGCG TGGCGGTCTG GAAGGGCCGG
GTCTATGTGG CGAGTTTCGA TGGTCGTCTT TTCGCGCTCG ACGCGAAGGA CGGTTCGGTC
GTCTGGGAAG TGAACACAAT CCCCGGCGCT CCCTACACCA TCACCGGCGC GCCGCGCGTC
TTCGACGACA TGGTCGTCAT CGGCAATGGC GGCGGCGAAT ATGGCGTGCG CGGCTACATC
ACCGCCTACG ACACCGAGAC GGGCGAAGAG CGCTGGCGCT TCTATACGGT GCCGGGCGAT
CCCTCGCTGC CGCTCGAACA TCCCGAACTG GAAGCAGCCG TTCCGACATG GAAGGGCGGC
GAATGGTGGA AGGTCGGCGG CGGCGGCACC GCATGGGATT CCATGGTCTA CGAACCTGAA
ACCGGAACGC TCTTCGTCGG CACCGGCAAT GGCTCGCCCT GGACGCGCGA GATCCGCTCG
CCCGGAGGCG GCGACAATCT CTATATCTCG TCGATCCTGG CGCTCGACGC GAAGACCGGC
CGTATGAAGT GGTACTACCA GACGACGCCC GGCGACAATT GGGACTACAC GGCGACACAG
CCCCTGATGC TTGCCGACAT CGAAATCGGC GGCGAGCCCC GCAAGGTCAT CATGCAGGCG
CCGAAAAACG GCTTCTTCTA TGTGCTCGAC CGGGAAACCG GCAAGCTCAT CTCGGCGAAC
CCGTTCTCGA CCGTCACCTG GGCGAGCCAT GTCGATCTGG AGACGGGCCG TCCGGTGGAA
ACCGGAGAGG GCGAGTATGG CGACCGCACG GCCTTCGTGC TGCCTTCCGC GAATGGCGCG
CATAACTGGC ACCCCATGGC TTTCCATCCC GGCACCGGCC TCGTCTATAT CCCGACGCAG
GACATTGCCG GCATCTATTC GCTCAGCGAA CAGTGGAAGA CCGAGAAGAA GTTCACGCCG
AAAGAGAACT GGTGGAACAC CGGCATCGAC TGGACCGACT ATATCGACGC GATCAACGCG
CTGCCGGAAC TGCCGATGGA GAAGGGCTAT CTCAAGGCCT GGAATCCGGC GACAGGCGAA
GTCGAATGGC AGGCCGAGTA TCCGGCGCCG CTCAATGGCG GCGTGCTGGC GACGGCGGGC
AATCTCGTCT TCCAGGGCAC GGCGGACGGC TATCTCTATG CCTACAAGGC CGATACGGGC
GAACAGGTCT GGGCGCAGCA TATCCAGACC GGCATCGTCG CGCCGCCCGT CACCTATCTG
GTCGATGGCG AACAATACAT CGCGGTGCTC GCAGGCTGGG GCGGCGTCAA CATCGTCTCC
GGCGATGCGC GCACATCGGC GGCAGCGAAA TACGGCAATC AGGGCCGCCT GCTCACGTTC
AAGCTCGGCG GCGGCGGTGT GCTCCCGAAG CTTGCGATGC TCGACCAGTC GATCCCGGAA
TGGCCGCCGC TCACCGCCTC CGAAGAAACC GTGCGTCAGG GCGAGATTGG TTATTCGACC
TACTGCATGC TCTGCCACGG CGCACTTGCC GTGTCGCCGG GTGTCACGCC CGATCTGCGC
CGCATGGGCG AAAGCACGCG CGAACACATT CAGGATATCG TGCGCGGCGG TATTCTCTCC
GATAATGGAA TGGCGAGCTT CGCCGACCAT CTGTCGGAAG AGGATGTCGA TGCGATCCTC
TCCTATGTGC AGAAGCGGGC GCTTGAGGAC CGGGCGCGGC AACAGCCGAC GAACTGA
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| Protein sequence | MADLGKMWPV AVNAAAGLVL AGFIGWQFVG GGEDEQVAEA PPAVEAPAAS APIEADRIEG
AVGVDAERII NADKEPGNWL AHGRTYDEQR FSPLDQITPE NIGQLSLAWA LDTDTARGLE
ATPIVVDGTM YMSLIWGITI AVDAKSGEEL WRFDPEVPGE WGRYGCCDVV NRGVAVWKGR
VYVASFDGRL FALDAKDGSV VWEVNTIPGA PYTITGAPRV FDDMVVIGNG GGEYGVRGYI
TAYDTETGEE RWRFYTVPGD PSLPLEHPEL EAAVPTWKGG EWWKVGGGGT AWDSMVYEPE
TGTLFVGTGN GSPWTREIRS PGGGDNLYIS SILALDAKTG RMKWYYQTTP GDNWDYTATQ
PLMLADIEIG GEPRKVIMQA PKNGFFYVLD RETGKLISAN PFSTVTWASH VDLETGRPVE
TGEGEYGDRT AFVLPSANGA HNWHPMAFHP GTGLVYIPTQ DIAGIYSLSE QWKTEKKFTP
KENWWNTGID WTDYIDAINA LPELPMEKGY LKAWNPATGE VEWQAEYPAP LNGGVLATAG
NLVFQGTADG YLYAYKADTG EQVWAQHIQT GIVAPPVTYL VDGEQYIAVL AGWGGVNIVS
GDARTSAAAK YGNQGRLLTF KLGGGGVLPK LAMLDQSIPE WPPLTASEET VRQGEIGYST
YCMLCHGALA VSPGVTPDLR RMGESTREHI QDIVRGGILS DNGMASFADH LSEEDVDAIL
SYVQKRALED RARQQPTN
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