Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1273 |
Symbol | |
ID | 5456332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1403654 |
End bp | 1404682 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640876843 |
Product | insertion element protein |
Protein accession | YP_001412550 |
Protein GI | 154251726 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3677] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.510438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.550669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCG TCCGGTTCGA ACGCCTGAAG GCGCGAGTTG CGAGAGAACT GACGCCCGAG CAGTGCGTCG AGCTCGGGGA GGTGGTCCAG GCCGCCGCCG CATCGCGGCT GGCCGATGTC GCGCTTGCGC GCCGTTCGGC GGCCGTGAGC AGCCGACGCG GATGTCCGCA TTGCGGTCAT GACGACATCG TGAAACACGG CCGCGATCGC GGAGGCAGGC AGCGATTTCG CTGCCGCCGG AGCGGCTCAT CCGGCTGCGG CCAAACCTTC AACGCCCTCA CCGGCACCGC CTTCACCCGT ATGCGCAAGC CGGAGAAGTG GGCTGCCTAC GCCCGCATGA TGGCCACCGG CTTCAAGTCG GTCGACGACG TGAAGACGAG CGGGCTTGGC ATCTCGCGGC TGACCGCCTG GCGCTGGCGT CATCGCCTCT TGCGCGCCCA GGCGCTGCGG CAGGCCGAAC GGGTGGGAGG CGTCATCGAG GCCGATGAAA CCTACTTTTT GAGTTCCTAC AAGGGACACC GGGGCTGGCA GAACGGGAAT CCGCCGGAGA ACCGCCCGCC GCGCTACCGC GGAGGCCCGG CCATCAACAG GGGACTCTCC AGCGAGCAAA TCCCCGTGCT CACGGCGCTC GACAACGCCG GCGGCATCAT CGAGGAAGTG CTGCCAAACC GCGCCGCCAT CGCTCCCGCG CTTCAGGGGC GTATCGCGCC GGGCTCCGTT CTCTGCTCCG ACGGGCACAA GGCCTATGTC AGCGCAGCGG TGAAAGCGGG CTCGGAACAT CGCCGCATCA TGACCCCGAA GAAGACGCAG GCAACGAAGG CCGTTGGCGG AAAACCTCGC CGCCCCGGAC GGCTCGGGCT CGGTCATGTG AATGCCCATC ACGAGCGCAC GAAGACCTTC GTCAACCGGC AGGTGCGCGG CGTCTCGACC CGGCATCTTC CGTTCTATCT CGGCTGGCTT CGGGCGCTCC GGAGGCCCGA CTTCTCGCCG GAGGCCCTCA TCGATGAGGC GTTATCCACA CTTAAGTAG
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Protein sequence | MDAVRFERLK ARVARELTPE QCVELGEVVQ AAAASRLADV ALARRSAAVS SRRGCPHCGH DDIVKHGRDR GGRQRFRCRR SGSSGCGQTF NALTGTAFTR MRKPEKWAAY ARMMATGFKS VDDVKTSGLG ISRLTAWRWR HRLLRAQALR QAERVGGVIE ADETYFLSSY KGHRGWQNGN PPENRPPRYR GGPAINRGLS SEQIPVLTAL DNAGGIIEEV LPNRAAIAPA LQGRIAPGSV LCSDGHKAYV SAAVKAGSEH RRIMTPKKTQ ATKAVGGKPR RPGRLGLGHV NAHHERTKTF VNRQVRGVST RHLPFYLGWL RALRRPDFSP EALIDEALST LK
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