Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1269 |
Symbol | |
ID | 5456833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1399171 |
End bp | 1399764 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640876839 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001412546 |
Protein GI | 154251722 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGGA AAGCAACAGC ACTCGACAGG ATTCGCGCCG CGACGCCCGA TGATGCGGCC GCGATCGCAG CCATCTATGC GCCCTATGTC CTCGACACGG CGATCTCCTT CGAGACCGTG CCGCCGGACG AGGCGCAGAT GGCGGCGCGG ATCGGGAAAA ACCAGCCTGT CCTGCCCTGG CTCGTTCACG AGTCCGGGGG CAGCGTGACT GGCTATGCCT ATGCCGGCCC GCACCGGGAG CGCGCCGCCT ATCGCTGGTC GGTCGATGCG GCCATCTATC TCGACAGCGG CGCGCACCGG AAGGGCATCG GCAGCGCGCT TTATGCCGTG CTCTTCGCGG CATTGCGGCT GCAGGGCTAT CACCGTGCCT ATGGCGGGAT CACGCTCCCC AACGCGGCCA GTGTCGGACT GCACGAGGCT CAGGGCTTCA GGCCGATCGG CGTCTACCCC GAGGTCGGTT TCAAGTTCGG CGCCTGGCGC GATGTCGGCT GGTGGGGCCT CGACCTCGCG CCGCCGGACC ACGAGCCCGC CGAGCCGCTG CCATTCACTC CCGAAATTCT CGAGCAGGCA AAGAAGAACG CTGCCAGGCT TTGA
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Protein sequence | MTGKATALDR IRAATPDDAA AIAAIYAPYV LDTAISFETV PPDEAQMAAR IGKNQPVLPW LVHESGGSVT GYAYAGPHRE RAAYRWSVDA AIYLDSGAHR KGIGSALYAV LFAALRLQGY HRAYGGITLP NAASVGLHEA QGFRPIGVYP EVGFKFGAWR DVGWWGLDLA PPDHEPAEPL PFTPEILEQA KKNAARL
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