Gene Plav_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1269 
Symbol 
ID5456833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1399171 
End bp1399764 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID640876839 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001412546 
Protein GI154251722 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGA AAGCAACAGC ACTCGACAGG ATTCGCGCCG CGACGCCCGA TGATGCGGCC 
GCGATCGCAG CCATCTATGC GCCCTATGTC CTCGACACGG CGATCTCCTT CGAGACCGTG
CCGCCGGACG AGGCGCAGAT GGCGGCGCGG ATCGGGAAAA ACCAGCCTGT CCTGCCCTGG
CTCGTTCACG AGTCCGGGGG CAGCGTGACT GGCTATGCCT ATGCCGGCCC GCACCGGGAG
CGCGCCGCCT ATCGCTGGTC GGTCGATGCG GCCATCTATC TCGACAGCGG CGCGCACCGG
AAGGGCATCG GCAGCGCGCT TTATGCCGTG CTCTTCGCGG CATTGCGGCT GCAGGGCTAT
CACCGTGCCT ATGGCGGGAT CACGCTCCCC AACGCGGCCA GTGTCGGACT GCACGAGGCT
CAGGGCTTCA GGCCGATCGG CGTCTACCCC GAGGTCGGTT TCAAGTTCGG CGCCTGGCGC
GATGTCGGCT GGTGGGGCCT CGACCTCGCG CCGCCGGACC ACGAGCCCGC CGAGCCGCTG
CCATTCACTC CCGAAATTCT CGAGCAGGCA AAGAAGAACG CTGCCAGGCT TTGA
 
Protein sequence
MTGKATALDR IRAATPDDAA AIAAIYAPYV LDTAISFETV PPDEAQMAAR IGKNQPVLPW 
LVHESGGSVT GYAYAGPHRE RAAYRWSVDA AIYLDSGAHR KGIGSALYAV LFAALRLQGY
HRAYGGITLP NAASVGLHEA QGFRPIGVYP EVGFKFGAWR DVGWWGLDLA PPDHEPAEPL
PFTPEILEQA KKNAARL