| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1268 |
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| Symbol | |
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| ID | 5455860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1398181 |
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| End bp | 1399134 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876838 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001412545 |
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| Protein GI | 154251721 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTC GCCGCCTGCC ATCGCTGAAA GCCTTGCGCG CCTTCGAGGC GGCGGCCAGG
CATGGCAGTT TCTCGCGCGC CGCGGCCGAA CTCAGCGTCA CCCATGCGGC GGTGAGCCAC
CAGATCAGGG CGCTGGAGGA GGAACTCGGC GCCGGTCTTT TTCACAGGAC GGGCAGGGCG
GTCGAACTCA CCGAGCGGGG CGAGCGGCTC TACCCGGTGC TGGCAGCCGC TTTCGACCAG
ATCGCGGAAG GCTGGTCGCA GGCGGGCGCG AAGGATACGG CCGCGCTCAC CGTTTCGGTC
GAGCCCTCCT TCGCGGCGCG CTGGCTGGTG CTCCGGCTCG GCAAGTTCAA CCGCGCGAAC
CCTGAGATCG AGCTTCGATT GCTGCCTTCC TCGGAGCTTG TCGATTTCAG CCGCGAGGAT
GTCGATATCG GCGTCCGCTA CGGGCTTGGC GGCTGGCCGG ACGTGGTCTC GGAAAAGCTC
TTCGAGGCGA CGGTCTATCC CGTCTGCAGC CCGGCGCTTC TCGATCCGAA AAAACCGATC
CGCAAGCCCG AGGACCTCAA ATCCTATCCG CTCCTCCATG AGGAGACGAT GGAGCACTGG
CAGCAATGGC TCGAAGCGGC GGGCGTCAAG CATCCGCGCT GGGCGCTGCG CGGCCCTCTC
TTCATCGAGG CGAGCCTGGC GCTGCAGGCG GCGGCGGGCG GGCAGGGTGT CGCGCTCGCC
AATGACACGC TCGCCATGGC CGACCTCGCC GAAGGCCGCC TCATTCGCCT CTTCGACATC
GAGATGCCGG ACGAGGAAGG CTATTGGCTG GTCTATCCGA AGGACGGGTT GAAGAAGCCG
AAAGTGCAGG CGTTCCGGAA CTGGATCCGC GAAGAGGCGG GGCTCGGTCC GCCCGAAGCG
CCGAAGCCGC CGGAAATGCT GACGCCCCGA GGCCGCGGCA AGGCGGTGCG CTGA
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| Protein sequence | MAIRRLPSLK ALRAFEAAAR HGSFSRAAAE LSVTHAAVSH QIRALEEELG AGLFHRTGRA
VELTERGERL YPVLAAAFDQ IAEGWSQAGA KDTAALTVSV EPSFAARWLV LRLGKFNRAN
PEIELRLLPS SELVDFSRED VDIGVRYGLG GWPDVVSEKL FEATVYPVCS PALLDPKKPI
RKPEDLKSYP LLHEETMEHW QQWLEAAGVK HPRWALRGPL FIEASLALQA AAGGQGVALA
NDTLAMADLA EGRLIRLFDI EMPDEEGYWL VYPKDGLKKP KVQAFRNWIR EEAGLGPPEA
PKPPEMLTPR GRGKAVR
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