Gene Plav_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1256 
Symbol 
ID5455706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1387355 
End bp1388179 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID640876826 
Producthypothetical protein 
Protein accessionYP_001412533 
Protein GI154251709 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.884363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.635489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA AGCGCGTCTT TCATCTTCAT CTCGTATCGG ATGCGACCGG CGAAACGCTG 
AACATGGTCG CGCGCGCGGC CTGCGCGCAA TATGAGGATG CGCGGCCGAT CGAGCATGTC
TATGCGCTGG TGCGCGGACC GAAGCAGCTT GAGCGCGTGC TGGGGGAAAT CGAAAATGCG
CCTGGCATCG TGATGTTCAC GATGGTGAAT GACGAGCTGC GCTCACGGCT GGAAAAACGC
TGCGCCGAAT TGCAGACGCC CTGCATTTCC GTGCTCGACC CGGCCATGCT GGCGCTCGGC
AAATATCTCG GCAAGGAATC CTCCCACAAG CCGGGCTCGC AGCACATCAT GGATGCGGAA
TATTTCGACC GCATCGCCGC GCTCAACTAC ACGATGGCGC ATGATGACGG ACAATCGGGC
GGCGATCTCG ACGATGCCGA CATCATTCTG CTCGGCGTCA GCCGCACCTC GAAGACGCCG
ACCTGCATCT ATCTCGCGAA CCGGGGCATC AAGGCGGCGA ACATCCCGAT CGTGCCGAAC
GCGCCGCTGC CGCCCGATCT TGAAACGGCG CAGAAGCCGC TGATTGTCGG CCTGACGACA
AGCCCCGATC GCCTGGTGCA AATCCGCAAG AACCGCCTTC TTTCGCTGCA CGAGAATACC
GACACCGATT ATGTCGCGCC CGACGTCGTC GCCGATGAAA TAGCCTTCGC GCGCAAGCTC
TTCGCGCGGA ACGGCTGGCC GGTGATCGAC GTCACCCGCC GCTCCATCGA GGAGACGGCG
GCGGCGGTCC TCAACCTCTA TAATGAGCGC CAGCGCGCGG TCTGA
 
Protein sequence
MNTKRVFHLH LVSDATGETL NMVARAACAQ YEDARPIEHV YALVRGPKQL ERVLGEIENA 
PGIVMFTMVN DELRSRLEKR CAELQTPCIS VLDPAMLALG KYLGKESSHK PGSQHIMDAE
YFDRIAALNY TMAHDDGQSG GDLDDADIIL LGVSRTSKTP TCIYLANRGI KAANIPIVPN
APLPPDLETA QKPLIVGLTT SPDRLVQIRK NRLLSLHENT DTDYVAPDVV ADEIAFARKL
FARNGWPVID VTRRSIEETA AAVLNLYNER QRAV