| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1248 |
|---|
| Symbol | |
|---|
| ID | 5455163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1381990 |
|---|
| End bp | 1382733 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640876818 |
|---|
| Product | import inner membrane translocase subunit Tim44 |
|---|
| Protein accession | YP_001412525 |
|---|
| Protein GI | 154251701 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.99982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACG GTTTGAATCT TCTGAACATC ATTCTGCTCG CGATCGCGGT CGGCGTGTTT
CTGAAACTCA GAAGCGTGCT CGGCCGGCGG ACGGGGCATG AGCGGCCTCC TTACGATCCC
TATTCAGAGA ATCCGGCGCC CGGAAACGAC AAGGTGGTGA CCTTGCCAAA GCGCGGCCGT
ACCGACGCAC CCGCGAGCGG CGCGCGCGAC CGCGTGATCG ACGCGGCGGG CGATCCCTTC
GCCAATGCGG GCGCACGCTT CCGTTGGCGC GGCGTCACCG AGGAAGGATC GCCGCTTGCC
GGCGCGCTCG ACGCGATTGC CGATGCCGAC CGCACCTTCG ACACGGAGTC ATTCCTTTCC
GGAGCGCGGA TGGCCTATGA GATGATCGTG ACGGCCTTTG CCGCGGGCGA CCGGGCGACG
TTGAAGCCGT TGCTCAGCGA CGATGTCTAT GCAAGTTTCG AAGGCGCGAT CTCGGCACGC
GAGAAGGCCG GGCTGCAGAT CGACCAGAGC TTCATCGGCA TCGACAAGGC GGCGATCACG
GGCGGCTCAC TCGACGGTAC GCGCGCGCGC CTCACCGTTT CCTTCCGCAG CGAATTGACA
TCCAGCACCA AGAACAGCGA CGGCGTGGTG GTCGAGGGCG ATCCCGTCAC CGTGCGCGAG
ATCACCGATG TCTGGACCTT CGAGCGCGAC CTGCGAAACC GCGATCCGAA CTGGAAGCTG
GTCGCGACCG GCGCAGCGGC CTGA
|
|---|
| Protein sequence | MDDGLNLLNI ILLAIAVGVF LKLRSVLGRR TGHERPPYDP YSENPAPGND KVVTLPKRGR
TDAPASGARD RVIDAAGDPF ANAGARFRWR GVTEEGSPLA GALDAIADAD RTFDTESFLS
GARMAYEMIV TAFAAGDRAT LKPLLSDDVY ASFEGAISAR EKAGLQIDQS FIGIDKAAIT
GGSLDGTRAR LTVSFRSELT SSTKNSDGVV VEGDPVTVRE ITDVWTFERD LRNRDPNWKL
VATGAAA
|
|---|
| |