| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1241 |
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| Symbol | |
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| ID | 5455964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1375508 |
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| End bp | 1376590 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640876811 |
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| Product | putative ABC transporter, substrate-binding protein |
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| Protein accession | YP_001412518 |
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| Protein GI | 154251694 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.944959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACC TATCGATCTT CCGGAAAACG GTCATGGCGG TTCTCGCCAT GCTTGTTCTT
TCTCTCTCTC TCACGGGACA AGCCGCGGCG CAGGAGAAAA AATCCTTCAA GTTGGCCTGG
TCTCTCTACA CCGGCTACAT GCCATGGGCC TATGCCGAGC ATGCCGGCAT CGTCGACAAA
TGGGCGGACA AATACGGCAT CGAGATCGAG GTCGTACAGA TCAACGATTA TATCGAGTCC
ATCAACCAGT ATACCGCCGG TGCTTACGAT GCCGTCGCGA ACACGGTCAT GGATTCACTG
ACCATTCCCG CTGCCGGCGG CGTCGATACC ACCGCGATCA TCCTTGGCGA CTATACCAAC
GGCAATGACG CGATCTTCAT CAAGGGTGAA GGCAAGACGC TGGCCGACAT CAAGGGCAAG
ACGGTGCATC TCGTGCAGTA TTCCGTTTCG CACTACATGC TGTCGCTTGC GCTCGCGAAG
GCAGGCCTGA CCGAAAGCGA CATCAAGACG GCGAATATCG CGGATGCGGA TTTCGTCGCC
GCCTTCTCGA CGCCCGAAGT CGAGGTCGTG GTTGCGTGGA ACCCGGCAAC GAGCCAGATG
AACCAGATGC CCGGCATCAC CTCGGTCTTC AATTCATCCG AAGTGCCGGG CGAAGTTCAG
GACATCGTTG TTGTCAATAC GGATGTGCTG AAGGCGAACC CGGATTTCGG CAAGGCGCTC
GCCGGCATCT GGTTCGAGAC GCTGGCGATC ATGAAAAAAG ACGATGCCGA GGGCATCGCC
GCCCGCACCT ATATGGCGCA AGCCTCCGGC ACCGACCTCG CCGATTTCGA AAGCCAGATC
GCGACGACGT ATTTCTACGA TGCGGCGGAA GGCGTCGAGG ATTTTTCAGG CCCGAAGATG
GCGGCCAGTG TCGAAAGCGT CGCCGGCTTC GCCTTCGCGC AAGGCCTGCT CGGACCGGAC
GCAAAGGATG CCGGTCACAT CGGCATCGAG CTTGCGGACG GTACGGTCTT CGGCGACGAG
AGCAATGTGA AGCTCCGCAT CGATACGAGC TACATGGAGA TGGCGTCCAA GGGCGAGATC
TAG
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| Protein sequence | MLHLSIFRKT VMAVLAMLVL SLSLTGQAAA QEKKSFKLAW SLYTGYMPWA YAEHAGIVDK
WADKYGIEIE VVQINDYIES INQYTAGAYD AVANTVMDSL TIPAAGGVDT TAIILGDYTN
GNDAIFIKGE GKTLADIKGK TVHLVQYSVS HYMLSLALAK AGLTESDIKT ANIADADFVA
AFSTPEVEVV VAWNPATSQM NQMPGITSVF NSSEVPGEVQ DIVVVNTDVL KANPDFGKAL
AGIWFETLAI MKKDDAEGIA ARTYMAQASG TDLADFESQI ATTYFYDAAE GVEDFSGPKM
AASVESVAGF AFAQGLLGPD AKDAGHIGIE LADGTVFGDE SNVKLRIDTS YMEMASKGEI
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