| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1239 |
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| Symbol | |
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| ID | 5455091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1373564 |
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| End bp | 1374112 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876809 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_001412516 |
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| Protein GI | 154251692 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.426925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAACG ACCCCATCAA CTGGCACGGC ACAACGATCC TGACCGTGCG CAAGGGGGGC
AAGGTCGTGA TCGCGGGAGA TGGCCAGGTA TCGATGGGCG ACACGATCAT GAAGGGGAAT
GCCCGCAAGG TCCGCCCGCT CGGCAAGGGC GACGTGATCG CGGGTTTTGC CGGCGCGACC
GCCGATGCCA TGACCCTCTT CGAGCGGCTC GAGGCGAAGA TCGAGCAATA TCCCGGGCAG
CTCACCCGCG CCTGCGTCGA GCTCGCCAAG GACTGGCGGA CCGACCGTTT CCTCCGCCGC
CTCGAGGCGC TGATGATCGT CGCGGACAAG GAGGCGACCC TCGTCCTTAC CGGCAATGGC
GATGTACTGG AGCCCGAAAG CGGCGTGGTG GGTATCGGCT CCGGCGGCAA TTACGCCCTT
GCCGCGGCTC GGGCCCTGAT CGACATGGAC CTCAGCGCCG AGGAGATCGC CCGCAAGGCC
ATGGGCATCG CAGCCAGCAT CTGCGTCTAC ACCAATAACA ACCTCACTGT CGAAAGCCTC
GACGCCTAG
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| Protein sequence | MTNDPINWHG TTILTVRKGG KVVIAGDGQV SMGDTIMKGN ARKVRPLGKG DVIAGFAGAT
ADAMTLFERL EAKIEQYPGQ LTRACVELAK DWRTDRFLRR LEALMIVADK EATLVLTGNG
DVLEPESGVV GIGSGGNYAL AAARALIDMD LSAEEIARKA MGIAASICVY TNNNLTVESL
DA
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