| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1238 |
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| Symbol | |
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| ID | 5453352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1372816 |
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| End bp | 1373430 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876808 |
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| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
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| Protein accession | YP_001412515 |
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| Protein GI | 154251691 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.350637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTG AACTGAAAAC CGAAGACGCA CTCCGCACTG TCTATCCGGA TCCCGGCCAG
ACGAGAGGCA AGGTGCTCCC GGCGCTCGAA GAGCATGCGC GGACCTTTAT CGGCCTTTCG
CCCTTTCTGT GCATCGGCAC CTCGCGCCCG GACGGACTGG CCGATGTCTC CCCGCGCGGC
GGCGAACAGG GCTTCGTTCA TGTGCTGGAT GACACGCATC TCGCCATGCC GGACCGGCCC
GGCAACAATC TGATCGATAC GCTTTCAAAC ATCGCGCAGT CGCCCTCCGT CGGCCTGCTC
TTCTTCGTGC CGGGCTTCGA GGAAATGCTG CGGGTGAACG GCGTGGCGAA AACGACGCTG
GACCCGGAGA TGATGGAACG CTTCGCGGTG GACGGGAAAA AGCCTCGCTC CGTCATGATT
ATCGAGGTGC GGGAGGTCTT CTTCCATTGC ACTAAGGCGC TGAAACGCTC CGGCCTGTGG
GACTCCTCAA AACATGTCCC GCGCGAGAAA ATGCCGAGCT TCGGCCAGAT CATTCGCGAC
CAGCTGAAGC TGCTCATCCC TGCGAAGATC ATCGATATGG GCCTTAACCA GGATGCGAAG
AAGAATCTCT ACTGA
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| Protein sequence | MSVELKTEDA LRTVYPDPGQ TRGKVLPALE EHARTFIGLS PFLCIGTSRP DGLADVSPRG
GEQGFVHVLD DTHLAMPDRP GNNLIDTLSN IAQSPSVGLL FFVPGFEEML RVNGVAKTTL
DPEMMERFAV DGKKPRSVMI IEVREVFFHC TKALKRSGLW DSSKHVPREK MPSFGQIIRD
QLKLLIPAKI IDMGLNQDAK KNLY
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