Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1232 |
Symbol | |
ID | 5453493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1367472 |
End bp | 1368998 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640876802 |
Product | CHAD domain-containing protein |
Protein accession | YP_001412509 |
Protein GI | 154251685 |
COG category | [S] Function unknown |
COG ID | [COG3025] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAC GTGAAATCGA ACTGAAGCTT CTTTGCGAGC CCGTCGAGCT TGACCGGATC AGGCAGGCGC CATCATTGCT CAAGCTGAAG CAGGGCCGCG CAACGGGCAA GCATCTCCAC TCCGTCTATT TTGATACGAA AAGCCTCGCG CTGGGCGATC ACGGTTTTGC GTTGCGCTTG CGCCGCGCCG GTGCGGCCTG TGTGCAGACC TTGAAAACGG AATCCGGCGC CTCAGGCGGC GCTACAGGCG CCCTTGCGAG GGATACGGGC GAGTATGAAG TGCGTCTTCC ACGCGGTGCG GAAAAGCCCG ATCTCAACAA ATTGCCGCAA GCGCTCAAGG CGCGCATCCA GAAGCTTGCG AACGGCGACG CGATCGGCGC GCGCCTCGTC AGCGATATTC GCCGCACCAT CCACAATCTC CAGACCGAAA ATGGCGATCT GATCGAGATG GCGTTCGACC TCGGCGCCCT GCAGGCGAAT GGCGGCGAAG CGCAGGTCAG CGAGATCGAA CTGGAACTGA AGGCAGGCAG TCCCGCAAGT CTCTACCGGA TCGCGCTCGA CCTGAACGAA GTTGCCGATC TGCGCGTCGG CACGAAAAGC AAATCCGAAC GCGGCTTTGC ATTGTTGCGT CCACGCGCGC CCGTCGCCGT GAAAGCCGAG CCGCTGCTGC TCGATCACAA TGCGCCGCTT GAAGATGCCT ATGGAGCGGT GCTCCGCCAT TGCCTCGTGC ACATGACGGC CAACGAAGCC GCCGCCGTCG ATGCGCGGCT GCCCGAAGGA TTGCACCAGA TGCGCGTCGC GCTTCGCCGC GCACGCTCGG CCTTCGAAAT TTTCCGCCCC GTCATCGGCG GCGCGCAGGC GGACAAGCTC GCGGCGGAAG CCAAATGGCT TGCGAACGAA CTTGGGCCCG CCCGTGATTT CGACGTCTTC GTTACCGAGA TTGTTGCGCC GGTGACGCCG CGCGGCGCAG GCTTCAAAAA ACTGCAGGCG CTGGCCGAAG AAAAACGGGC CGAGAAATGG GAACGTGCAC TTACCGCGTT GCGCTCGCGC CGTTATACGC GCTTCCTGCT TGAATACGGC CTTTTCCTTG CCGAGCAGGA TTGGCGCTTG AAACGCAAGG CGCCGGCCTT GGCGCGGATC TTCGCGGCAG AAGCTCTCGA CAAGCGCCTC GCCAAGGTTG CAAAGCGCGG TCGCGACTTC GAGAAGCTTG AAGGCGAGGC GCGTCACGAC CTGCGCAAAC AGTTGAAGAA GCTTCGTTAT GGACTGCATT TTTTCTCCTC GCTCTACGAT GCTGGCGAGG TGAAGCCTTA TCTGAAGCAT CTCGGCGAAA TGCAGGATGT GTTTGGCGGG CTGAACGACG TCGCGACCGC TCATCTGATC CTCGACGATA TGCCGGGCGA AGGTGCGGTG GGGGAAGCGG CCGCTCGCGT GATCGCCTGG CACGGCGAGC GGGCGGAGAA AGCCTGGAAG GGGGCGATCC GTCTCTGGAA GCGCTTCAAT GCCGTCGACC CTTTCTGGCG CGTCTGA
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Protein sequence | MSEREIELKL LCEPVELDRI RQAPSLLKLK QGRATGKHLH SVYFDTKSLA LGDHGFALRL RRAGAACVQT LKTESGASGG ATGALARDTG EYEVRLPRGA EKPDLNKLPQ ALKARIQKLA NGDAIGARLV SDIRRTIHNL QTENGDLIEM AFDLGALQAN GGEAQVSEIE LELKAGSPAS LYRIALDLNE VADLRVGTKS KSERGFALLR PRAPVAVKAE PLLLDHNAPL EDAYGAVLRH CLVHMTANEA AAVDARLPEG LHQMRVALRR ARSAFEIFRP VIGGAQADKL AAEAKWLANE LGPARDFDVF VTEIVAPVTP RGAGFKKLQA LAEEKRAEKW ERALTALRSR RYTRFLLEYG LFLAEQDWRL KRKAPALARI FAAEALDKRL AKVAKRGRDF EKLEGEARHD LRKQLKKLRY GLHFFSSLYD AGEVKPYLKH LGEMQDVFGG LNDVATAHLI LDDMPGEGAV GEAAARVIAW HGERAEKAWK GAIRLWKRFN AVDPFWRV
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