| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1232 |
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| Symbol | |
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| ID | 5453493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1367472 |
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| End bp | 1368998 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876802 |
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| Product | CHAD domain-containing protein |
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| Protein accession | YP_001412509 |
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| Protein GI | 154251685 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3025] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC GTGAAATCGA ACTGAAGCTT CTTTGCGAGC CCGTCGAGCT TGACCGGATC
AGGCAGGCGC CATCATTGCT CAAGCTGAAG CAGGGCCGCG CAACGGGCAA GCATCTCCAC
TCCGTCTATT TTGATACGAA AAGCCTCGCG CTGGGCGATC ACGGTTTTGC GTTGCGCTTG
CGCCGCGCCG GTGCGGCCTG TGTGCAGACC TTGAAAACGG AATCCGGCGC CTCAGGCGGC
GCTACAGGCG CCCTTGCGAG GGATACGGGC GAGTATGAAG TGCGTCTTCC ACGCGGTGCG
GAAAAGCCCG ATCTCAACAA ATTGCCGCAA GCGCTCAAGG CGCGCATCCA GAAGCTTGCG
AACGGCGACG CGATCGGCGC GCGCCTCGTC AGCGATATTC GCCGCACCAT CCACAATCTC
CAGACCGAAA ATGGCGATCT GATCGAGATG GCGTTCGACC TCGGCGCCCT GCAGGCGAAT
GGCGGCGAAG CGCAGGTCAG CGAGATCGAA CTGGAACTGA AGGCAGGCAG TCCCGCAAGT
CTCTACCGGA TCGCGCTCGA CCTGAACGAA GTTGCCGATC TGCGCGTCGG CACGAAAAGC
AAATCCGAAC GCGGCTTTGC ATTGTTGCGT CCACGCGCGC CCGTCGCCGT GAAAGCCGAG
CCGCTGCTGC TCGATCACAA TGCGCCGCTT GAAGATGCCT ATGGAGCGGT GCTCCGCCAT
TGCCTCGTGC ACATGACGGC CAACGAAGCC GCCGCCGTCG ATGCGCGGCT GCCCGAAGGA
TTGCACCAGA TGCGCGTCGC GCTTCGCCGC GCACGCTCGG CCTTCGAAAT TTTCCGCCCC
GTCATCGGCG GCGCGCAGGC GGACAAGCTC GCGGCGGAAG CCAAATGGCT TGCGAACGAA
CTTGGGCCCG CCCGTGATTT CGACGTCTTC GTTACCGAGA TTGTTGCGCC GGTGACGCCG
CGCGGCGCAG GCTTCAAAAA ACTGCAGGCG CTGGCCGAAG AAAAACGGGC CGAGAAATGG
GAACGTGCAC TTACCGCGTT GCGCTCGCGC CGTTATACGC GCTTCCTGCT TGAATACGGC
CTTTTCCTTG CCGAGCAGGA TTGGCGCTTG AAACGCAAGG CGCCGGCCTT GGCGCGGATC
TTCGCGGCAG AAGCTCTCGA CAAGCGCCTC GCCAAGGTTG CAAAGCGCGG TCGCGACTTC
GAGAAGCTTG AAGGCGAGGC GCGTCACGAC CTGCGCAAAC AGTTGAAGAA GCTTCGTTAT
GGACTGCATT TTTTCTCCTC GCTCTACGAT GCTGGCGAGG TGAAGCCTTA TCTGAAGCAT
CTCGGCGAAA TGCAGGATGT GTTTGGCGGG CTGAACGACG TCGCGACCGC TCATCTGATC
CTCGACGATA TGCCGGGCGA AGGTGCGGTG GGGGAAGCGG CCGCTCGCGT GATCGCCTGG
CACGGCGAGC GGGCGGAGAA AGCCTGGAAG GGGGCGATCC GTCTCTGGAA GCGCTTCAAT
GCCGTCGACC CTTTCTGGCG CGTCTGA
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| Protein sequence | MSEREIELKL LCEPVELDRI RQAPSLLKLK QGRATGKHLH SVYFDTKSLA LGDHGFALRL
RRAGAACVQT LKTESGASGG ATGALARDTG EYEVRLPRGA EKPDLNKLPQ ALKARIQKLA
NGDAIGARLV SDIRRTIHNL QTENGDLIEM AFDLGALQAN GGEAQVSEIE LELKAGSPAS
LYRIALDLNE VADLRVGTKS KSERGFALLR PRAPVAVKAE PLLLDHNAPL EDAYGAVLRH
CLVHMTANEA AAVDARLPEG LHQMRVALRR ARSAFEIFRP VIGGAQADKL AAEAKWLANE
LGPARDFDVF VTEIVAPVTP RGAGFKKLQA LAEEKRAEKW ERALTALRSR RYTRFLLEYG
LFLAEQDWRL KRKAPALARI FAAEALDKRL AKVAKRGRDF EKLEGEARHD LRKQLKKLRY
GLHFFSSLYD AGEVKPYLKH LGEMQDVFGG LNDVATAHLI LDDMPGEGAV GEAAARVIAW
HGERAEKAWK GAIRLWKRFN AVDPFWRV
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