Gene Plav_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1201 
Symbol 
ID5454048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1338263 
End bp1338784 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content65% 
IMG OID640876772 
Producthypothetical protein 
Protein accessionYP_001412479 
Protein GI154251655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA CTGCGGCTCC CCGCATGCGC GGCGGCCCTC TGCCGTCAGC GCTCCCCCAT 
GACACCATTA CCCACGTCGA ACTGACGTGG GTCGAGAAGA AGATCGAATA CTGGATCAGG
TTCGGCCGTG AGGCGCATGA ACAGATCCTC GACCGCCGCC GGCGTGTCGT CTCCTTCCGT
CCGAACACCG TATTCGCGTT CGTGCGATGG GCGGCCAACG ACTTCGGCAC GATTATCTCG
CGCATCGACA TCGTACGCGC AGTCGAGCCC GGAGAGCCCT ACCAGACGCT GCCTTTCGTC
CGGCCGGGCG GTGAAATCCT GCTCAGGATC GACGGATGGC CAAAGGTCGA AGACGTGCTG
CGCCACGTCG ATGCAATTGA AGCGGTCGGC ATCGAGGCGG ACGCCGTTTC GCCGGAACAC
TGGCGTCACG TCCACAACCG GATGGCGGCT GGACATCAGC CGCGCACCTA TACGCTCGAC
CAGCATCGCG CCGTCCTCCT GCGCCGGAGG ACGTGGTCGT GA
 
Protein sequence
MTGTAAPRMR GGPLPSALPH DTITHVELTW VEKKIEYWIR FGREAHEQIL DRRRRVVSFR 
PNTVFAFVRW AANDFGTIIS RIDIVRAVEP GEPYQTLPFV RPGGEILLRI DGWPKVEDVL
RHVDAIEAVG IEADAVSPEH WRHVHNRMAA GHQPRTYTLD QHRAVLLRRR TWS