| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1194 |
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| Symbol | |
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| ID | 5456227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1330915 |
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| End bp | 1331898 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876765 |
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| Product | P-type conjugative transfer ATPase TrbB |
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| Protein accession | YP_001412472 |
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| Protein GI | 154251648 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.442732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATA TCAGCCAGAA GCCGGAGGCG TTCGCGCGCG GTGCGCGCAT GCTTCGCACC
GCGCTCGGCT CGACCATCAC CCATTTTCTC GAAGACCCGG CCGTGGTCGA AATCATGCTG
AACCCGGACG GCCGTCTCTG GGTAGATCGC CTCTCCGAAG GGCTGGCCGA TACGGGTGAG
ACGCTGTCGC CTGCCGATGG CGAGCGCATC GTGCGGCTGG TCGCTCACCA TGTCGGCGTC
GAGGTGCATC CGCGCAGCCC GCGAGTCTCC GCCGAGCTTC CTGAGACGGG AGAGCGGTTC
GAGGGCTTGC TGCCGCCCGT TGTCGCCGCA CCGGCCTTCG CCATCCGCAA GCCCGCCGTA
GCGATCTTCA CGCTCGACGA TTATGTGGCC GCCGGAATCA TGTTCGCCGA CCAGGCGGCG
ACGCTACGCG CAGCCGTGAT GGCGCGCGCC AATATCCTTG TCGCAGGCGG CACTTCCACC
GGCAAAACCA CGCTGACCAA TGCGCTTCTG GCCGAGGTCG CCAAGACGGC GGATCGCGTC
GTCATCATCG AGGATACCCG CGAGCTTCAG TGCGCCGCGC CCAATCTTGT CGCCATGCGG
ACCAAGGATG GAGTGGCCAC GCTCTCGGAG CTGGTTCGCT CTTCGCTACG CCTGCGCCCC
GATCGCATTC CCATCGGCGA GGTGCGCGGC TCTGAAGCTC TCGATCTCCT GAAAGCATGG
GGAACCGGCC ACCCCGGCGG CATCGGCACG ATCCACGCCG GGAGCGGCAT CGGCGCGCTG
CGCCGCCTTG AACAACTCAT CCAGGAGGCC GTCGTCACGG TCCCGCGCGC CCTGATCGCC
GAGACCATCG ATCTTGTTGC CGTCCTCTCC GGCCGCGGCT CCGCGCGCCG GCTCGCCGAA
CTCGCCCGCG TCGATGGGCT CGGTCCGGAC GGCGACTACG CCATCACCCC CGCAACCCTT
GACCGTACAG GAGCGCCATC ATGA
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| Protein sequence | MTNISQKPEA FARGARMLRT ALGSTITHFL EDPAVVEIML NPDGRLWVDR LSEGLADTGE
TLSPADGERI VRLVAHHVGV EVHPRSPRVS AELPETGERF EGLLPPVVAA PAFAIRKPAV
AIFTLDDYVA AGIMFADQAA TLRAAVMARA NILVAGGTST GKTTLTNALL AEVAKTADRV
VIIEDTRELQ CAAPNLVAMR TKDGVATLSE LVRSSLRLRP DRIPIGEVRG SEALDLLKAW
GTGHPGGIGT IHAGSGIGAL RRLEQLIQEA VVTVPRALIA ETIDLVAVLS GRGSARRLAE
LARVDGLGPD GDYAITPATL DRTGAPS
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