| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1192 |
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| Symbol | |
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| ID | 5454221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1330305 |
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| End bp | 1330586 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640876763 |
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| Product | conjugal transfer protein trbB |
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| Protein accession | YP_001412470 |
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| Protein GI | 154251646 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5268] Type IV secretory pathway, TrbD component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.567843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCGG CGTTCGAACA ACTCGACGCG GTGCCGGGTT TCACCGTCCC GGTTCACCGG
GCGCTGACCG AGCACATTCT GCTCGGCGGC GCACCGCGCG CACTCGCCAT CCTGAACGGC
ACGCTGGCCG GAGCCGTGGG CCTTGGCCTG CGCCTCTGGC TCGTCGGTCT GCTGATCTGG
GCCATTGGCC ATATCGCAGC CGTATGGGCT GCAAAGCGCG ATCCCCTCTT CGTCGAGGTC
GGTCGCCGTC ACCTGCGCAT CCCCGCTCAT CTGTCCGTCT GA
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| Protein sequence | MAAAFEQLDA VPGFTVPVHR ALTEHILLGG APRALAILNG TLAGAVGLGL RLWLVGLLIW
AIGHIAAVWA AKRDPLFVEV GRRHLRIPAH LSV
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