| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1190 |
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| Symbol | |
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| ID | 5455393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1327055 |
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| End bp | 1327834 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876761 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001412468 |
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| Protein GI | 154251644 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGC TTCGTTCACG CCCGCGCGCG ATGTCGCTCG CGGCCTTCAT CCTGGCGATA
CCGCTCGCCG CATCGCCGGT GCTGACCGCG CCAGCGCACG CGCAATTCGG CTTCGGCGGT
ATCGTCTATG ACCCTACCAA CTACGCCCAG AACGTCCTGA CGGCGGCGCG GTCCCTCGAG
CAGATCAACA ACCAGATCCG CTCGCTTCAA AACGAGGCGC AGAGCCTCAT CAACCAAGCC
AAGAATCTGG CGAACCTGCC GTACTCGGCG CTCCAGCAGA TTCAACAGAA CGTCCAACGC
ACCCAGCAGC TCCTCGGCCA GGCGGAGAAC ATCTCTTTCG ACGTCCAGAA CGTCGATCGG
ATGTTCCAGC AGCAATATGG CAGCGTCTCA CTGTCGTCGT CGGACGCCAA GCTCATCACC
GACGCTCGCT CGCGCTGGCA GAACACCGTC GGCGGCTTGC AGGACGCCAT GCGCATTCAG
GCCGGTGTCG TCGGCAATAT CGACAGCAAT CGCACGCAGA TGTCGAACCT CGTCAGCCAG
AGTCAAGGCG CGCAGGGTGC GTTGCAGGCG ACACAGGCCG GCAATCAGCT TCTCGCGCTG
CAATCGCAGC AGCTCTCCGA CCTGATCGCG CTGATCTCCG CCAACGGCCG GGCCACGGCG
CTGACTGACG CGGAGCGCGC GGCGGCGGCT GATCAGGGCC GGGAGCAGCG CCGCCGCTTC
CTCACGCCGG GCGCGGGCTA TCAGCCCGGC AACGCGCAGA TGTTCGGCAA CGGCAACTGA
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| Protein sequence | MNTLRSRPRA MSLAAFILAI PLAASPVLTA PAHAQFGFGG IVYDPTNYAQ NVLTAARSLE
QINNQIRSLQ NEAQSLINQA KNLANLPYSA LQQIQQNVQR TQQLLGQAEN ISFDVQNVDR
MFQQQYGSVS LSSSDAKLIT DARSRWQNTV GGLQDAMRIQ AGVVGNIDSN RTQMSNLVSQ
SQGAQGALQA TQAGNQLLAL QSQQLSDLIA LISANGRATA LTDAERAAAA DQGREQRRRF
LTPGAGYQPG NAQMFGNGN
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