| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1172 |
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| Symbol | |
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| ID | 5453429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1302889 |
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| End bp | 1304145 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876743 |
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| Product | integrase family protein |
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| Protein accession | YP_001412450 |
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| Protein GI | 154251626 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.69238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACGG ACGCTGCCAT TAAGGCTTTG AGACCACGCG ATAAAATGTA CAAAGTGACG
GACCGTGACG GGATGTACGT GTTGGTCTCA CCGACCGGCG CGTTGACCTT CCGCTTCGAC
TACCGTTTGA ACGGGCGCCG GGAAACGGTG ATTATTGGCA GGTACGGCCC AACGGGCGTT
TCGCTTGCGC GCGCCCGCGA GAAGCTGATC GAGGCCAAAC TGATGATTCA GGACGGCGTC
TCGCCTGCGT TCGAAAAGCG ACGCGAGAAG CGCCGGATCA AGGAAGCCAA GAGTTTCGGC
GAATTTGGCG AGCGCTGGCT GCAAGACGCG CGAATGGCCG ATAGCACCCG CGCCATGCGC
CGCACCATCT TCGAGCGCGA TATTCTGCCG ACATTCCGGA ACCGGCTCCT GCACGAGATT
CTGCCTGAGG ACCTGCGAGC GATGTGCGAG AAGGTGAAGG CGAGAGGCGC ACCGGCGACG
GCGGTCCATG TCCGGGACAT CGTGAAGCTG ATCTTTGCCT TCGCGATCTT GCACGGCGAG
AAGGTTTCCA ACCCAGCCGA CGAGGTTGGC CCATCCTCGA TCGCAACCTT CGTGCCGAAG
GATCGATCGC TATCCCCCTC GGAAATACGC ATCATGCTCA CCCAGCTCGA GCATGTCGCG
ACTTTGCCGA CGATACGCCT CGGAATGAAA CTGTTCCTGC TATCGATGGT GCGAAAGAGC
GAATTACAGG ATGCCGTGTG GGACGAAGTC GATTTCGAGA ACGCGGTTTG GTCGATCCCG
AAGGAGCGGA TGAAGCGCTC GAAGGCTCAC AACGTCTATC TCTCGCAGCA GATGCTCGAC
ATTTTCATCG CTCTCAAAAC CTGCGCGGGA AACTCGAAAT ACGTTCTGCC GTCACGTTAC
GACGCCGACG CCCCGATGTC GCGGGCGACG TTCAACCGGA TCACGGTGGC CGTGGTGGAG
CGCGCCAAGA AGGAAGGCTT GCCGCTGGAG GCATTTACGA TCCATGATCT CCGGCGAACC
GGCTCAACCT TGCTGAATGA GGTGGGCTTC AACAGCGACT GGATCGAGAA GTGTCTGGCG
CATGAGGATG GACGGTCCTC GCGGGGCATC TACAACAAGG CCGAATATGA ACACCAGCGC
CGGCATATGA TGCAGGAATG GTCCAATCTG GTGGATGCGT GGGTCGCTGG TCAGAAATAC
ACGCCGACCC TTTATCCGCC GAGGATGGAC CTGCTTACGC CCGAGTTTGA TGCCTGA
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| Protein sequence | MLTDAAIKAL RPRDKMYKVT DRDGMYVLVS PTGALTFRFD YRLNGRRETV IIGRYGPTGV
SLARAREKLI EAKLMIQDGV SPAFEKRREK RRIKEAKSFG EFGERWLQDA RMADSTRAMR
RTIFERDILP TFRNRLLHEI LPEDLRAMCE KVKARGAPAT AVHVRDIVKL IFAFAILHGE
KVSNPADEVG PSSIATFVPK DRSLSPSEIR IMLTQLEHVA TLPTIRLGMK LFLLSMVRKS
ELQDAVWDEV DFENAVWSIP KERMKRSKAH NVYLSQQMLD IFIALKTCAG NSKYVLPSRY
DADAPMSRAT FNRITVAVVE RAKKEGLPLE AFTIHDLRRT GSTLLNEVGF NSDWIEKCLA
HEDGRSSRGI YNKAEYEHQR RHMMQEWSNL VDAWVAGQKY TPTLYPPRMD LLTPEFDA
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