| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1169 |
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| Symbol | |
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| ID | 5456886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1299129 |
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| End bp | 1300430 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876740 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001412447 |
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| Protein GI | 154251623 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCG GCGCACGTCT GCAATCCGCG ATAAGCGTTC TCAGTGACAT CTTCAAGAGC
GGCCGCCCTG CCGACCGTGT CTTCGACACA TGGGCGCGCT CCAATCGCTA TGCAGGGTCC
AAAGACCGCG CGGCAGTAAG CGATCTTGTC TTCACGGTTT TGCGCCGCCG AGCTGAATTG
ACCGCTGCCG TCGGTAGCGA TGATGCGCGC CTTCTCGCCT TCGCTGCCCT CACTCTCGGC
GCGGAACAAG GCGTTGACGA GGTCGCGGCT TTGGCCGATG GCGCGCGCCA CGCTCCGGAA
CCTCTGAGCC CGGAAGAACA GACCGCGCTG TCCATGGCGG TATTACCCGG AGAGAGTGCT
CCCCCCTGGA CCAGATTTAA CTACCCCGAA TGGCTCCATC CCGAATTTGA AGCAGCCTTT
GGTAACGGGC TCGAGCGGGA GATGGCCGCT TTTATGGAGC GAGCGCCCAC TGATCTTCGG
GTCAACACGC TGAAAATGAA GCGGGAGAAG GCGCTGGCGG CTCTCACCGG CGAAGGCCTT
TCCGCCGAGG CCACCCCTTG GTCGCCATGG GGGCTCAGGC TCACCTCGCG GGGCAATGTC
CTCGGCCTTG CCACCTTCCG TGATGGCATT GTCGAGATTC AGGACGAAGG CTCGCAGCTC
GCCTGCCTGC TCGCCGGTGC GGCGCCGGGC GAACAAGTGG TTGATCTTTG TGCTGGCGGT
GGCGGCAAGT CGCTGGCGCT CGCGGCCATG ATGAAAAATC ACGGTCAGAT TTACGCCTGC
GATACGGACG CCCGCCGCCT CTCCGGCCTC ACCCCTCGCG TTCGCCGCGC CGGCATACGC
AATCTTCAGA CCCGCGTGCT CGGCCCTTTC ACGCCGGATA TGGCGGACAA AGACCTCGCC
GGCCTTGCCT CACACGCGGA TTGCGTCCTT GTCGATGCGC CCTGCAGCGG CACCGGCGCG
TGGCGTCGCA GCCCCGGCGC ACGCTGGAGC TTGAGCCCCG AAATGCTCAT GGGGTACCGG
GCGGCACAGG CCGAGGTGTT GACGCGTGGT GCCCGCCTAG TCCGTCCCGG CGGCAGGCTG
GTCTATGTGA CCTGCTCCCT GCTTCCCTCG GAAAACGAAA CCCAGGTCGA AGCTTTTCTC
GCCGTCCATC CGGCATTTAC GCCCCAGCCA TGGGCGTCCA ACTGGCCCGA GCATGTGCCG
CTCCCGCCCG CACCGCACGG CAACTGGCTT CGTCTCACGC CTGCCTCCAC CGGAACGGAC
GGTTTTTTTG TCGCCATTCT GCGGCGGGAG GCGCGCTCAT GA
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| Protein sequence | MTPGARLQSA ISVLSDIFKS GRPADRVFDT WARSNRYAGS KDRAAVSDLV FTVLRRRAEL
TAAVGSDDAR LLAFAALTLG AEQGVDEVAA LADGARHAPE PLSPEEQTAL SMAVLPGESA
PPWTRFNYPE WLHPEFEAAF GNGLEREMAA FMERAPTDLR VNTLKMKREK ALAALTGEGL
SAEATPWSPW GLRLTSRGNV LGLATFRDGI VEIQDEGSQL ACLLAGAAPG EQVVDLCAGG
GGKSLALAAM MKNHGQIYAC DTDARRLSGL TPRVRRAGIR NLQTRVLGPF TPDMADKDLA
GLASHADCVL VDAPCSGTGA WRRSPGARWS LSPEMLMGYR AAQAEVLTRG ARLVRPGGRL
VYVTCSLLPS ENETQVEAFL AVHPAFTPQP WASNWPEHVP LPPAPHGNWL RLTPASTGTD
GFFVAILRRE ARS
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