| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1167 |
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| Symbol | |
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| ID | 5454527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1296763 |
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| End bp | 1297527 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876738 |
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| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
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| Protein accession | YP_001412445 |
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| Protein GI | 154251621 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.942006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACA GCGGAAAAAC CGGCGGCAAA AGCGGCAAGG GAGGCACGGG CGGCGCCCGG
GCCCTGAAGG TGCGCGTGAA AACGGCGCGC AAACGCAGCA ACTCCTCTAC CCGCTGGCTG
CAGCGGCAGC TGAATGATCC CTATGTCCAC GCCGCGAAGC GCGAGGGGTA TCGCTCCCGT
GCTGCCTTCA AACTTGCCGA GATAGACGAC AAATACCGCT TCCTGAAGCC CGGCGGCCGA
GTGGTCGATC TTGGCTGTGC GCCGGGTGGC TGGTGCCAGG TCGCGGTAGC ACGGGTAAAG
GCGGAAGGCG GCGATGCGGG CGCCGAAGGA CGGCATGGCC GCGTCATAGG GCTCGACTAT
CTGGAGATGG ACCCGGTTCC TGGCGCCACG ATCCTTCAAC TCGACTTCCT CTCCGAAGGG
GCGGATGACC AGGTAAAGGA GCTTCTGGCG GGCGAGGCGG ACGTCGTCCT CTCCGACATG
GCAGCGCCGA CAACGGGCCA CAAGCAGACC GACCATATGC GGATCATGTC GCTGTGCGAA
ATCGCCGCCC ACTTCGCAAC AGAAGTCCTG GCCCCGGGAG GCACCTTTCT CGCCAAGGTG
TTGCGGGGTG GAACGGAGAA TGAGCTTTTG GTGCTCCTCA AGCAGCACTT TAAAACTGTC
CGCCATGTGA AGCCCAAGGC CAGCCGGGCC GATTCGGCGG AGATGTACGT TTTGGCCCAA
GGCTTTAAGG GGCGTAGTGA AAGCCCTCTC GATGATGCGG AGTGA
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| Protein sequence | MTNSGKTGGK SGKGGTGGAR ALKVRVKTAR KRSNSSTRWL QRQLNDPYVH AAKREGYRSR
AAFKLAEIDD KYRFLKPGGR VVDLGCAPGG WCQVAVARVK AEGGDAGAEG RHGRVIGLDY
LEMDPVPGAT ILQLDFLSEG ADDQVKELLA GEADVVLSDM AAPTTGHKQT DHMRIMSLCE
IAAHFATEVL APGGTFLAKV LRGGTENELL VLLKQHFKTV RHVKPKASRA DSAEMYVLAQ
GFKGRSESPL DDAE
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