| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1165 |
|---|
| Symbol | |
|---|
| ID | 5453917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1293160 |
|---|
| End bp | 1294974 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640876735 |
|---|
| Product | cyclohexanone monooxygenase |
|---|
| Protein accession | YP_001412443 |
|---|
| Protein GI | 154251619 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.785376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGA AATCGAGTAG CGAAAAGGCG GAACTTGGTT TCGACCCGGC AGCCCTGAAG
GCGAAGTATC GTGCCGAGCG CGACAAGCGT CTGCGCGCGG ATGCCAACGA GCAGTATGTG
GAGATTAAAG GCCAGTTCGC GCACTACCTC GAAGATCCTT ATGTCGAACC GGGCTATGCT
CGCGCAGCGC TCTCCGATGA GGTCGACGTG GTGATGGTTG GCGGAGGCTT CGGCGGACTG
CTGGCCGGCG CTCGCTTGCG CGAGGCTGGC GTCGACAAGG TTCGCATTAT CGAAAAGGGC
GGAGACTTCG GCGGGACATG GTACTGGAAC CGCTATCCGG GCGCGGCGTG CGATATAGAA
TCCTATATCT ATCTCCCGCT TCTCGAAGAA ATCGGCTACA TCCCGGTCGA GAAATATTCC
AAGGCGGCGG AAATTCTCGC CCACAGCCGC GCCATCGGCG AACATTTCGA CCTCTATCGC
GATGCGCTTT TTCAGACCGA AGCGACGGAA CTACACTGGA ACGATGCCGC CGCGCGCTGG
ATTGTCCGCA CCAACCGCGG CGACGCGATC CGCGCCCGCT TCGTGGTAAC GGCCAGCGGT
CCGCTGCATC GCCCAAAGCT CCCCGGCATT CCCGGCGTTG AAACCTTCCA AGGGCATTCT
TTCCACACGA GCCGTTGGGA TTACGGCTAC ACAGGCGGTG ATTGCAATGG CGGGCTCGAC
CGTCTGAAGG ACAAGCGTGT CGCCATCATC GGAACGGGCG CAACGGCCGT GCAATGCGTG
CCGCATCTCG GCGCCCGGGC GAAAGAACTG TTCGTCTTCC AGCGTACGCC CTCATCTATC
GACGTCAGAA ACAACCGTCC GACCGATCCT GAATGGGTAC AGAAGCTGCA GCCTGGCTGG
CAGCAACACC GGATGGACAA CTTCAACACG CTTGTCTCCG GCGGGTATCA AGAGGAGGAC
CTTGTCAACG ACGGCTGGAC CGACATCATC GGTAACCTGC TGGTCATGGC GCGCAAGGGA
GCTGCGGGAC GTTCCCCGGC CGAGATGGGT GAGATTGTTC AACTTGCTGA CTTCCAGAAA
ATGGAATCGA TCCGCAAGCG CGTGGAAACG GTGGTGAAAG ATTCGTCAAA GGCTGAGGCG
CTGAAGCCCT GGTACAATCA GTTCTGTAAG CGTCCCTGCT TCCACGATGA ATATCTCGAC
ACGTTCAACC GGCCAAATGT ACACCTGATC GATACGCAGG GCAGGGGCGT TGAGCGCATC
ACAGAGCATT CGATTGTCGC GAATGGGCAG GAATTTGAAG TCGATTGTCT GATCTATGCG
ACCGGCTTTG AGGTCGGCAC GAGCTACACG CGGCGCGCAG GTTTCGAAAT CTACGGCCGT
GATGGGGTGT CGCTCAGCGA AAAGTGGAAG GATGGCATCT CGACCCTGCA TGGGATGCAC
AGCCGTGGCT TCCCGAACTG CTTCATCGTC AGCAACTCGC AGGCGGGCTT CACCGCCAAC
TACCCGCACA TGCTCAATGA GCAGTCGAAG CATCTATCCT ACATTGTGAA GGAATGCATC
GACCGCCAGG CCCGCGTCGT TGAAGTGACC GAGGACGCGG AAAAGGAATG GGTGGAAGCG
ATCATCAAGG CGTCCGTCTT CAACAGGCGC TTTCTCGAAG AATGCACGCC CGGCTACTAC
AACAACGAGG GCAAACCCTC TGAGCTCGCT ATCCGAAATG GATTTTACGG TGGCGGCTCC
GTCGCCTTTA TTAAAATCCT CGAAGAATGG CGCGCCAAAG GCGACTTGCC GGGTCTCGAG
TTGAACGTCG GCTGA
|
|---|
| Protein sequence | MNGKSSSEKA ELGFDPAALK AKYRAERDKR LRADANEQYV EIKGQFAHYL EDPYVEPGYA
RAALSDEVDV VMVGGGFGGL LAGARLREAG VDKVRIIEKG GDFGGTWYWN RYPGAACDIE
SYIYLPLLEE IGYIPVEKYS KAAEILAHSR AIGEHFDLYR DALFQTEATE LHWNDAAARW
IVRTNRGDAI RARFVVTASG PLHRPKLPGI PGVETFQGHS FHTSRWDYGY TGGDCNGGLD
RLKDKRVAII GTGATAVQCV PHLGARAKEL FVFQRTPSSI DVRNNRPTDP EWVQKLQPGW
QQHRMDNFNT LVSGGYQEED LVNDGWTDII GNLLVMARKG AAGRSPAEMG EIVQLADFQK
MESIRKRVET VVKDSSKAEA LKPWYNQFCK RPCFHDEYLD TFNRPNVHLI DTQGRGVERI
TEHSIVANGQ EFEVDCLIYA TGFEVGTSYT RRAGFEIYGR DGVSLSEKWK DGISTLHGMH
SRGFPNCFIV SNSQAGFTAN YPHMLNEQSK HLSYIVKECI DRQARVVEVT EDAEKEWVEA
IIKASVFNRR FLEECTPGYY NNEGKPSELA IRNGFYGGGS VAFIKILEEW RAKGDLPGLE
LNVG
|
|---|
| |