| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1160 |
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| Symbol | |
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| ID | 5456865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1288007 |
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| End bp | 1289140 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876730 |
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| Product | glucose sorbosone dehydrogenase |
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| Protein accession | YP_001412438 |
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| Protein GI | 154251614 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATC CGGCACGGGC GATGACTACA ATCGCGGTTA CTCTTCTGGC TGCGCTGTGG
GCCGCAGGCT CCGCTCCAGT TCACGCACAG GAAGCCGCCG GATCGTATGA AATCGTGCCG
ATTGCGGAGG GGCTCGATCA CCCATGGAGC CTTACATTCA TGCCGGATGG TTCCATCCTG
GTCGTGGAGC TGTCCGGTAA TGTCCGGATC ATTCGGGGGG GCGTGCTCTC CCCGGATTCG
GTTGCTGGCA TCCCGGATGT TTACTTCGAA AGCCAGGGCG GACTTTTCGA CCTGCTGCTC
GACCCCGAAT TCTCCACGAA TGGTTTCGTT TACCTCTCCT ATGCGCATGG TACGCCCGGC
GAGAACAGAA CGCGCGTAGC AAGGGCACGC TTTGACGGGG CATCGCTCAG CGACGTCGAG
GTTATATTCG ACGCTGAACC GGCGAAGAAC ACACCCGTGC ATTACGGCGG TCGTATGCTC
TTTCTTCCGG ATGGAACGCT GCTCGTGACG GTGGGCGATG GATTCGATTA CCGGGAGGAC
GCGCAGAGAC TCGATGTCGA TTTCGGCAAG GTCGTCCGAA TCAACCGAGA CGGCAGCGTG
CCGGAAGACA ATCCTTTCAT CGGCCGCGAA GGGGCTAAGC CGGAGATTTG GACGCTGGGG
CATCGCAACG CGCAAGGTAT CGTCTACGAC AACCTCTCGG GAAGGGTCTA TCTCCACGAG
CACGGGCCGC AGGGCGGCGA TGAGATCAAC ATCATCGAAC CTGGCAAGAA TTACGGCTGG
CCCGTCATCA CTTATGGCCT CGATTATTCG GGTGCGCGCA TTTCGCCCTA TACGGAATAT
GAAGGAATGG AACAGCCGCT TCTTCACTGG ACGCCCTCGA TCGCGCCAGC GGGGTTTACG
CTTTATCGTG GCAGCGTGTT TCCCGAATGG GATGGCGACC TGTTTGCCGG TGCGCTTGCG
GCCAAGCATC TTCGGCGTGT CGACATGGAG AATGGACAGC CTGTCGGCCA GGAAGAGCTA
TTCGGCGAGC TCGGCCAGCG CATTCGCGAG GTGCGCACGG GACCGGACGG ATATCTCTAT
CTCGTGACCG ACGGCGAAAA CGGCAGCGTA TTGCGCGTCG CACCCAAAGA ATAA
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| Protein sequence | MTNPARAMTT IAVTLLAALW AAGSAPVHAQ EAAGSYEIVP IAEGLDHPWS LTFMPDGSIL
VVELSGNVRI IRGGVLSPDS VAGIPDVYFE SQGGLFDLLL DPEFSTNGFV YLSYAHGTPG
ENRTRVARAR FDGASLSDVE VIFDAEPAKN TPVHYGGRML FLPDGTLLVT VGDGFDYRED
AQRLDVDFGK VVRINRDGSV PEDNPFIGRE GAKPEIWTLG HRNAQGIVYD NLSGRVYLHE
HGPQGGDEIN IIEPGKNYGW PVITYGLDYS GARISPYTEY EGMEQPLLHW TPSIAPAGFT
LYRGSVFPEW DGDLFAGALA AKHLRRVDME NGQPVGQEEL FGELGQRIRE VRTGPDGYLY
LVTDGENGSV LRVAPKE
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