| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1154 |
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| Symbol | |
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| ID | 5455001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1277249 |
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| End bp | 1279249 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876724 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_001412432 |
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| Protein GI | 154251608 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.527463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.586098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATA TGGGAGACCT GCTCTGGTCG CCGTCCGAGG GGATGGTGGC CGATGCAAAT
GTCACCGCCT TCATCGCCTG GCTTAATGCG CGCGGCCATT CCTTTGGCGG CTATGAGGAT
TTGCGGCGAT GGTCCGTGGC CGATATTGCG GCGTTCTGGG AGGCGGTCTG GCAGTTCTTC
GGGGTCACGT CGTCGACGCC TTACGAATGC GTGCTGCGCG ATGAAAAGAT GCCGGGGGCG
GAATGGTTTC CGGGGGCGCG GGTGAACTAC ATCCGGACGC TCCTGTCCAA GGGGAGCGGG
AACAAAACCG CGATCCATGC GGCCGGCGAG GAAGGAAAAG CGCGGAAAAT CAGCTGGGAC
GAGCTGAAAA CGCAGGTCTT CAAGGTGGCA ACGGCGTTGC GCGAGCTCGG TATCGGACCC
GGCGACCGCG TGGTTTCCTA TATGCCGAAC GTGCCGGAAG CGGCGGTTGC GTTCTTCGCG
ACGGCGAGCA TCGGCGCGGT GTGGTCGAGC TGTTCGCCGG ATTTCGGGGC GGCGAGCGTG
ATCGACCGCT TCAGCCAGAT CGCTCCGAAA CTCCTTTTTG CTACAGACAG TTACCGGTAT
GGCGGCAAGA ATTTCGACCG GCGGGCGGAG GTGCGCGCGA TGGTCGACGC CCTGCCCTCG
CTGCAGCATG TGGTGCATGT GGCGGGCGCC GATCCGGACT ATGGCAGCGA GCCCCTGACG
GCCGAAGCGA TTGCCTGGGG GAAGCTGATT TCGAGACCGG CGGTGAGCGA AACAAGGTTC
GTTTTCGAGG ACACGCGCTT CGACCATCCC TTGTGGATCG TCTATTCATC GGGGACGACG
GGACTGCCGA AACCGTTTGT CCACGGACAT GGCGGTGTGC TTCTGGAAGC ACTGAAATTC
ACGCATTTTC ACCTGAATCT GAAGCCGGAC TCGTGCATGT TCTACTTCAC GACGACGGGC
TGGGTGATGT GGAATATCCT CCTGTCAGGG CTTGTCGCGG GGTCTGCGGT GGTGCTTTAC
GACGGCAATC CGATGACGCC GAAGCCGGAC CGGTTGTGGG AACTGGCGGC GGAGACGGGC
ATGACGCTTT TTGGGGCGAG CCCGACTTTT CTCAATGGAC AGATGAAGTT AGGTATCGTT
CCCAACAAGA TTTACGACCT CGAGCGGATG AAGAGCATCC TGCTTGGCGG CTCGCCGGTG
ATGCCGGAAC ACATGGAATG GTGCTTCGAA AACCTGCATC CCGACATGTG GGTGACGTCG
CAAAGCGGCG GTACGGATGT CGCTTCCGCC TTTGTGGGCG GGGTGCCGAC GCTGCCGGTT
CATGCAGGAG AAATCCAGGC GCGGTGCCTC GGCGTCGACG TCCATGCCTT TGACGATAAA
GGGGAATCCG TCATCGGGGA GGTTGGCGAG CTGGTGGTCA GCAAACCGAT GCCGTCGATG
CCGCTGTTCT TCTGGAACGA CGAGGGCGGG CACCGTTATC ATGATTCCTA TTTCGATACG
TATACGGATC ATTGGCGGCA TGGCGACTAC TTCAAGGTCA ATGAACGGGG CGGCTGTTTC
ATTCTCGGTC GCTCGGATTC GACGCTGAAC CGCTATGGCG TAAGGATCGG CACGGCGGAA
ATTTACCGGA CAATAGAAGG ACTTGAGGAG ATCGAGGACT CGATCATCGT CAATCTCGAC
CTGCCCGGCG GAAACTTTTT CATGCCGCTT TTCGTGGTGC TGAAGGACGG CGTGGCGCTC
AGCGATGCGG TAAGGGAAAA GATCAACAAA TCGCTGCGGG AAAAGTACTC TCCGCGCCAT
GTGCCTGATC GCATTTATGA AATCGACGCG GTGCCCTATA CGCTGACGGG CAAGAAAATG
GAGGTGCCGG TGCGCAAGAT ATTGCTCGGT GTGCCGGTGG ACAAGGCGGC GAGCCGCGAC
GCCATGGCAA ACCCTTCTGC CATCGACTAT TTTCGCGATT TCGCGGCGAC GCAGACCGAG
TATTCGACGG CCGCGGACTG A
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| Protein sequence | MANMGDLLWS PSEGMVADAN VTAFIAWLNA RGHSFGGYED LRRWSVADIA AFWEAVWQFF
GVTSSTPYEC VLRDEKMPGA EWFPGARVNY IRTLLSKGSG NKTAIHAAGE EGKARKISWD
ELKTQVFKVA TALRELGIGP GDRVVSYMPN VPEAAVAFFA TASIGAVWSS CSPDFGAASV
IDRFSQIAPK LLFATDSYRY GGKNFDRRAE VRAMVDALPS LQHVVHVAGA DPDYGSEPLT
AEAIAWGKLI SRPAVSETRF VFEDTRFDHP LWIVYSSGTT GLPKPFVHGH GGVLLEALKF
THFHLNLKPD SCMFYFTTTG WVMWNILLSG LVAGSAVVLY DGNPMTPKPD RLWELAAETG
MTLFGASPTF LNGQMKLGIV PNKIYDLERM KSILLGGSPV MPEHMEWCFE NLHPDMWVTS
QSGGTDVASA FVGGVPTLPV HAGEIQARCL GVDVHAFDDK GESVIGEVGE LVVSKPMPSM
PLFFWNDEGG HRYHDSYFDT YTDHWRHGDY FKVNERGGCF ILGRSDSTLN RYGVRIGTAE
IYRTIEGLEE IEDSIIVNLD LPGGNFFMPL FVVLKDGVAL SDAVREKINK SLREKYSPRH
VPDRIYEIDA VPYTLTGKKM EVPVRKILLG VPVDKAASRD AMANPSAIDY FRDFAATQTE
YSTAAD
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