| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1149 |
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| Symbol | |
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| ID | 5453998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1268936 |
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| End bp | 1270819 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876719 |
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| Product | hydantoinase/oxoprolinase |
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| Protein accession | YP_001412427 |
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| Protein GI | 154251603 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.129864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCTTC TTGTAAGCAT CGACAATGGC GGCACGCTGA CGGATGTCTG CGCCACGGAT
GGCATGTCCA CCATCCACGC CAAGACCATC ACCACGCCGC ATGATCTGAC GGAATGCTTC
GTCAAATGTC TCGAAGCACT CTCCGAAAAA ATCAGCGGCG AGGTCGACCT GCCGAAACTT
GTCGGCGCCA TCGACTACAT CCGCTATTCG ACCACGCAGG GCACCAACGC CATCGTGCAG
CGCAAGGGCC CGCGCATCGG CCTGTTGACG GATGACGACG CGCTCCTTTC GGGCGCCATG
AATGCCGCGC CCGCGCTCTT CGAGGCTTTC GTTGGCGACT GCATCCGCGT CGTCTCGCCC
GCCGCCGCGT CCTCCGCCAC ATCCGAACTC GTGATGGCCG TCTCGAAGCT CGTCTCCTCC
GGCGCAAGCC GCATCGTCAT CGCCTTCTCC GGCGCCGAGG CCGTCGCGCA TGAGAAGGCC
GCCAAGCGCG CGCTCTACCG CGCCTTCCCG CGCCACCTTC TCGGCGCCGT GCCGCTCCTC
TTCTCCACCG AGTTGACGCG CATCGGCACG GTCGAGCAGC GTGTCTGGAC GAGCGTCGTC
AACGCCTTCC TCCATCCCGC GATGGAAACC TTCCTCTACA ACGCCGAGAA CAAGCTCCGC
GAGCACCGCG CGAGGAAGCC TCTCCTCATC TTCCGCAACG ACGGCAACTC CACCCGCGTC
GCGAAAACGG TCGCGATCAA GACCTATTCC TCCGGCCCCC AAGGCGGTGT CGTCGGCGGC
GAAGTGCTCC TGAAGCATTA CGGCATCCCC GCCGCCGTCT CCATCGACAT CGGCGGCACG
ACCACCGACA TCGCCGTCTT CGACGACGCC ACAGTCGCCG TCGCCGATGC CGGCCACATC
GAGGGCGCGC CGGTTTCCAT CCCGCTCTCC GCTGTCGAAA GCATCGGCGC CGGCGGCGGC
TCCATCATCC GCGCCGAAGG CGGCGAGATC CTCGTCGGCC CCGAAAGCGT CGGCTCGGCC
CCCGGCCCCG CCTGCTTCGC GCGCGGCGGC ACCAGCGCCA CCATGACCGA TGCCTTCCTC
GCCCTCGGCA TCCTCGACCC GCACTCCTAT TTCGGCGGAC GCATGGTGCT CGACCGCGAG
CGCGCCGCCC GCGCCATCAT GGCCCATGTC GGCGACCCGC TGGGCCTGCC GCTCGCCGAC
GCCGCCGAAG CCATGGCCGC CGCCTATCAC GGCAAGATCG CCGCCACGCT GAAATCCTGG
GCGGGCGAAA ACCCGGACGC CACGCTCCTC GCCTTTGGCG GCGCGGGGCC CATGTCCGCC
TGCGGTGTCG CCGAAATGGC CGGCCTCAAG ACCGTCCTCA TCCCGAAATT CGCTGCCGTC
TTCTCCGCCT ACGGCATCGC CTTCTCCGAC ATCGAACACA GCTATATGGC CGAACTCGTC
CGCGACAGCG ACGGCGCGAT CGCCCGCGCC AAGGCCGATC TCGCGGAGCA AGCCCGCCGC
GGCATGCTCG CCGAAGGCTT CGACCTCGAA GAATGCCGCC TCGATTATGC GGTGCTGACG
AAGAACGGCA GCGGCTACAC CCGCGCCAAA CTGAACGGCC AGCTCGACCG CGCCAACATC
GAAACCTGGC TCGAACTGCG CGTCACCAAA CCCATCGACA AGATCGCGCT GGGCGGCACC
GAAAGCAGCG AGACGCGAAA GGCAACACCC TCCGGCATCC GCAAGGGAAC GTCCGACCTG
CCGCTCTTCC GCCTCGAGGA ACTCCTCCCC GGCGATTGGC ATGACGGCCC CTGCCTCGTC
GAGGAAGCCT TCTTCACCAC GCATGTCCGG CAGGGCTGGC GCTTCGTCGT CAGTGGCAAT
GGCGACCTTT TCCTGAAGCG CTGA
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| Protein sequence | MGLLVSIDNG GTLTDVCATD GMSTIHAKTI TTPHDLTECF VKCLEALSEK ISGEVDLPKL
VGAIDYIRYS TTQGTNAIVQ RKGPRIGLLT DDDALLSGAM NAAPALFEAF VGDCIRVVSP
AAASSATSEL VMAVSKLVSS GASRIVIAFS GAEAVAHEKA AKRALYRAFP RHLLGAVPLL
FSTELTRIGT VEQRVWTSVV NAFLHPAMET FLYNAENKLR EHRARKPLLI FRNDGNSTRV
AKTVAIKTYS SGPQGGVVGG EVLLKHYGIP AAVSIDIGGT TTDIAVFDDA TVAVADAGHI
EGAPVSIPLS AVESIGAGGG SIIRAEGGEI LVGPESVGSA PGPACFARGG TSATMTDAFL
ALGILDPHSY FGGRMVLDRE RAARAIMAHV GDPLGLPLAD AAEAMAAAYH GKIAATLKSW
AGENPDATLL AFGGAGPMSA CGVAEMAGLK TVLIPKFAAV FSAYGIAFSD IEHSYMAELV
RDSDGAIARA KADLAEQARR GMLAEGFDLE ECRLDYAVLT KNGSGYTRAK LNGQLDRANI
ETWLELRVTK PIDKIALGGT ESSETRKATP SGIRKGTSDL PLFRLEELLP GDWHDGPCLV
EEAFFTTHVR QGWRFVVSGN GDLFLKR
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