| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1146 |
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| Symbol | |
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| ID | 5455987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1263901 |
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| End bp | 1264740 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640876716 |
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| Product | TonB family protein |
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| Protein accession | YP_001412424 |
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| Protein GI | 154251600 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.167411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTTG GCATAGTGAG CACAAGCCCG GAGGCGCCGC CCCGGCCGAC CTTCCATGTC
GCGCCGCCGC CGCCGCCCCG CCCGAAGACG TGGAGCGAGT TCGCCATCGC GCTCGCCATT
GCCCTTTTCC TCAATCTTCT GCTGCTGCTC CCCTTCCTCC TCCAGTCGCC GGCCGTCGCG
CCGCCCTTCG AGGAGCCGGA GGCGATCTCG GTTGAACTGG TGCAGGAGCC TCGGCAGGAA
GAGCCCCAGC CGGAGCCCCA ACCTGAGCCG CAGCCGGAAC CGGCGCCGGA AGTGCCCTCC
GCGCAGAGAA CCTTCACCCG CTCCGGCGGC GACAGCGACG AGCCGCCGGG AGATCCCGTC
GAGGAGGAGC CCGCCGATCC CGCCGCCACG GAACCGGACC TGCAGCCGGA TGAAACGACG
GTCGAGCCGC GCGAGGAACA GGCCGCCGAG GATATTCCCG GCTGGGCCCG CACCATCGAG
CCTGGCTACG ATGTGCGAGC CGGCAATCCG CAGGCCACCG CCGCCGCAAA ACAGGCCACG
CGCGGTGGCG GCGGTGGCGA TGCCTATCTG AATGCGATGG GAAAGCGCAT CGTCGCGAAT
GTCGTCTATC CGAGGGAGGC CGCCGGCAGG ACCGGCGTCA TCGTCTTTGA CCTTGTGGTC
CACCGCTCGG GCGTCATTCG GCAGGCCGTG GTCGTCTCCT CCACCGGCGT GCCCTCGCTG
GACCGCGCCG CGACCGAAGC CCTCCAGCGA AGCCAGCCTT TCGCGCCTTT CCCGCCGGGT
GTCATGGTGG AAACGGCCCA GCTCCGGCTG ACGCTGAAAG TGGCGCCGAA CATGCCTTGA
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| Protein sequence | MVVGIVSTSP EAPPRPTFHV APPPPPRPKT WSEFAIALAI ALFLNLLLLL PFLLQSPAVA
PPFEEPEAIS VELVQEPRQE EPQPEPQPEP QPEPAPEVPS AQRTFTRSGG DSDEPPGDPV
EEEPADPAAT EPDLQPDETT VEPREEQAAE DIPGWARTIE PGYDVRAGNP QATAAAKQAT
RGGGGGDAYL NAMGKRIVAN VVYPREAAGR TGVIVFDLVV HRSGVIRQAV VVSSTGVPSL
DRAATEALQR SQPFAPFPPG VMVETAQLRL TLKVAPNMP
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