| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1144 |
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| Symbol | |
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| ID | 5455392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1261743 |
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| End bp | 1262852 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876714 |
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| Product | agmatine deiminase |
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| Protein accession | YP_001412422 |
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| Protein GI | 154251598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.84564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGGT TGCTTGAGAC GACACCGAAG GCGGATGGCT TCCGCATGCC CGCCGAGTTC
GAGCCCCATG CCGGCACATG GATGCTCTGG CCGGAGCGAC CGGACAACTG GCGGCTGGGT
GCGAAGCCCG CCCAGCACGC CTTCGTCGCC GTCGCGGAAG CGATTTCCGG CGGCGAGCCG
GTCACGGTCG GCGCCTCGCC GCGCCAGTTC GCCAACGCGC GTGCGATGCT GCCGCCCCAA
ATCCGCGTCG TCGAAATCTC GAACGACGAT TCATGGATGC GCGATTGCGG CGCCACCTTC
GTTGTCGACG GCAAAGGCGG CGTCCGCGCC ATAGACTGGA TATTCAACGC CTGGGGCGGT
CTCGACGGCG GCCTCTATTT TCCCTGGGAT CAGGACGATC TCGTCGCGTC CAAAATGGCC
GAAATCGAGC GCGTGGACCG CTACCGCGCG CCCATCATCC TCGAAGGCGG CTCCATCCAT
GTCGACGGCG AAGGCACGCT CCTTACGACG GAGGAATGCC TTCTCAATCC CAACCGCAAC
CCCGGCCTCT CCCGAGCGGA GATCGAAGCC GTCCTCACCG ATTATCTCAA TCTTGAGAAA
ATCGTCTGGC TCGGCCTCGG TGTCGTCGAG GACGAAACAA ACGGCCACGT GGACAATCTC
TGCTGCTTCG TGCGTCCCGG CGTCGTCGCC CTCACATGGA CCGACGACAA GGCCGACCCG
CAATACGACG TTTCGCACGA CGCCTTCGAG CGCCTCTCCG CCGCCACCGA CGCGCGCGGG
CGCCGCTTGG AAATTCACAA GCTCCACCAG CCGGGTCCCC TCTACATCAC GGAAGAGGAA
AGCGGCGGCG TCGATGCGGT GGAAGGTACG CAACCCCGTC TTCCCGGCGC CCGTCTCGCT
GCCTCCTATG TCAATTTCTA CATCGCCAAC GGCGTCGTCG CCGTGCCCGT CTTCGGCGAC
CCGCATGACG GCGCCGCCAT CGACAAGATT GCCGCGCTAT TGCCCGGCCG CAAGGTCGTC
GCCGTGCCTG CTCGGGAAAT CCTGTTGGGG GGCGGCAACA TCCATTGCAT CACTCAGCAG
CAGCCCGCGC CTCGCAGCAT GAAGGGCTGA
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| Protein sequence | MVRLLETTPK ADGFRMPAEF EPHAGTWMLW PERPDNWRLG AKPAQHAFVA VAEAISGGEP
VTVGASPRQF ANARAMLPPQ IRVVEISNDD SWMRDCGATF VVDGKGGVRA IDWIFNAWGG
LDGGLYFPWD QDDLVASKMA EIERVDRYRA PIILEGGSIH VDGEGTLLTT EECLLNPNRN
PGLSRAEIEA VLTDYLNLEK IVWLGLGVVE DETNGHVDNL CCFVRPGVVA LTWTDDKADP
QYDVSHDAFE RLSAATDARG RRLEIHKLHQ PGPLYITEEE SGGVDAVEGT QPRLPGARLA
ASYVNFYIAN GVVAVPVFGD PHDGAAIDKI AALLPGRKVV AVPAREILLG GGNIHCITQQ
QPAPRSMKG
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