| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1139 |
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| Symbol | |
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| ID | 5454559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1255299 |
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| End bp | 1257473 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876709 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_001412417 |
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| Protein GI | 154251593 |
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| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein
[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTC AGGGCTTCCC TGCGACGGAA GACGCGGGAG GGCGGGAAAA GAGTGCCGTG
CTTCAGGCCG CGCGCAATGT CTGGCGCGTG GAGAAAGCCG CGCGGGCGCA CCTCCTTGTG
GATGGCGCGG CTTACTATAG CGCCGTCCGC CATGCGATGC GCAATGCCGA ACATTCGCTC
ATCATCGTCG GCTGGGATAT CGACAGTCGC ACCCGCCTTG TGGGTGAAAG CGGCAAGGCG
GATGATGGTC TTCCCGAGAC CTTAGGGGAA TTTCTGAAGG CGCTGGCGAA GGAAAAGCCG
GACCTCTCCA TAAAGATTCT CCTTTGGGAC TATTCCGTCC TTTATGCGAT GGAGCGCGAG
CTTCTCCCCG TCGTCGCCTT CCGCTGGAGC ACGCCCGGCA ATATCGACCT CTGCCTCGAC
GATCGCGTGC CGATCGGCGC CTCGCATCAC CAGAAGATAG TCGCGATCGA TGACAAGCTT
GCCTTCTGCG GCGGCCTCGA CATCACGGTC CGCCGCTGGG ACACCTCCGC CCACGATCCA
CGAAATGCCG GCCGCGTCGA TCCGGCGAAC GAACCCTATC GCCCCTTCCA CGATGTGCAG
ATGATGGTCG ATGGGCCCGC AGCCGCGGCA CTGGGCGATC TTGCGCGCCG CCGCTGGGAA
CATGCCGCCG CCGAGAAGCT CGATCCCCCG CGCACCGGCG GCGACCCCTG GCCCCGCTCC
ATCGACTCGC ATTTCCGCGA TGTTTCCGTC GGCATCGCCC GCACCGAACC TCCTTATTCC
GGCCGCCCGG AAGTCCGTGA AGTGCAGGCA CTCTTCGGCG ATATGGTCGC CGCTGCGCAA
CGCTGGATCT ATATCGAGAA CCAGTTCCTG ACCTGCACGG ATTTCGCCCG CCGTCTCGCC
GCCCGTCTCC GGCAGCTTCC CTCGCTCGAG GCGCTCCTCG TCGTGCCGGA AACCCATCAC
ACATGGCTGG AGCATCGCAC CATGCTGATG GGACGCATCC GCTTCATGGA AATCCTGCGT
GAGGCCGGTG TCGCGGATCG CGTCCGCCTG CTTCATCCCA CTATAGGCGA AGGCGACGAG
GCGGTCCCCA TCATGGTCCA TTCCAAGGTG ATGATCGTCG ACGACGCCAT TCTCCGTGTC
GGCTCCGCCA ATCTCTGCCA TCGCTCGATG GGCATGGATT CCGAATGCGA CCTCGCGGTG
GAGGCCGACA GCGGCGATGG CCGCGAAGCC GTCTTGGCGG CGCTTGGCCG CCTGCTTGGC
GAGCATTGCG GTGCCGACCC CGCGCGCATC GTCGCCACGC TCCGCGAGTC AGACTCTCTT
TTCACCGCCA TGGACAATTG CGGCAGCAAG ACGCGCCGCC TCAATCCGGT AGAAGACGCA
ACCGACCTGT CCGGTGAAAC GGCCAGTGCC ATAGAAGCAG TGGCTGACCC GGTTCAGCCC
ATAGGCGCGG GCGAATATTT CGCCGATATC GTCGATTTCG CAGGCGAAGC GGACAAGAGC
GGCGGCCTCT CCGCCATGGC GAAAGCGACT GCCGCCCTTC TCTTTGTCGG CGCTCTGGTG
CTTCTCTGGC GCTACACGCC GCTCTCCGAT TACGCCGATC CGCAGACGCT GCGCTCTTCC
TTCGATGGAG TCGCCGCTGG TTCCTTCGCG CCCGTCATTG TCGTCGCCAT ATATGTGTTG
ACCGGCTTCA TCGCCTTTCC CGTCACCGTG CTCATCGTCG CCACGGCCGC GACCTTCGGT
CTCTGGCCGG GCCTCCTCTA TGCGGGCATA GGCTCCCTCG CAAGCGCCGC CGCCACATAC
CTGGCCGGCC GTTCGCTCGG TGCCGACATG CTGCGAAATC TCATCGGCCC CCGCATCAAT
CGCATCGGCC GCGGCATCGG CAAGCGCGGC GTCGTCACCA TCATGACGAT ACGCCTCGTG
CCGGTCGCAC CTTTCATGCT GGTCAATCTC GTGGCGGGGG CTCTGCGCGT GCCGATTATC
GACTACATGG TCGGGACCTT GCTCGGCCTC GCGCCCGGCA TCCTGGTCCT GTCCGTCCTT
GGTGATCGCG TCTTCACGAT CCTCCAGGAC CCATCGCTGC TCGATATCGC GATCATCCTC
GGCTCGCTCG CGGCATGGAT CGCCCTTGCG CTCGGCCTCC AGCGCCTCAT CTCGAAAAGG
CGGAGTTCGA GGTGA
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| Protein sequence | MSVQGFPATE DAGGREKSAV LQAARNVWRV EKAARAHLLV DGAAYYSAVR HAMRNAEHSL
IIVGWDIDSR TRLVGESGKA DDGLPETLGE FLKALAKEKP DLSIKILLWD YSVLYAMERE
LLPVVAFRWS TPGNIDLCLD DRVPIGASHH QKIVAIDDKL AFCGGLDITV RRWDTSAHDP
RNAGRVDPAN EPYRPFHDVQ MMVDGPAAAA LGDLARRRWE HAAAEKLDPP RTGGDPWPRS
IDSHFRDVSV GIARTEPPYS GRPEVREVQA LFGDMVAAAQ RWIYIENQFL TCTDFARRLA
ARLRQLPSLE ALLVVPETHH TWLEHRTMLM GRIRFMEILR EAGVADRVRL LHPTIGEGDE
AVPIMVHSKV MIVDDAILRV GSANLCHRSM GMDSECDLAV EADSGDGREA VLAALGRLLG
EHCGADPARI VATLRESDSL FTAMDNCGSK TRRLNPVEDA TDLSGETASA IEAVADPVQP
IGAGEYFADI VDFAGEADKS GGLSAMAKAT AALLFVGALV LLWRYTPLSD YADPQTLRSS
FDGVAAGSFA PVIVVAIYVL TGFIAFPVTV LIVATAATFG LWPGLLYAGI GSLASAAATY
LAGRSLGADM LRNLIGPRIN RIGRGIGKRG VVTIMTIRLV PVAPFMLVNL VAGALRVPII
DYMVGTLLGL APGILVLSVL GDRVFTILQD PSLLDIAIIL GSLAAWIALA LGLQRLISKR
RSSR
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