| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1136 |
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| Symbol | |
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| ID | 5455858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1252530 |
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| End bp | 1254023 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876706 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_001412414 |
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| Protein GI | 154251590 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCTCA CAGACAGGCA GAGGCGGCGC GTCTCTCCCG CTGAAGAAGA CGCGACCGGC
ACACCGATCC CGACGCGTAT CGTCTCGAAC GGCGAATACA TGCCGATGCC GCAGACGCCG
GATCAGGCCC GCGTGGAAAG CGGCATTCTT GCTGCCGCCG ATGAACAGGG CGGTAGGCTC
GGCATGGATC GCCGCGCCTT CCTGCGTTCG GGCGCAGGCC TCGCCGCCTC CTTCATGGTC
ATGAACAAGG TCTTCGGCGG CGACGTCTTC TCCGTCGCTC ATGCCGAAAC GCTCGATCCC
GCCGCCGCCG CCGAGCGCGC CGCCCGTTTC GCCGATCAAT ATATCGTCGA CATGCAGCTC
CATTTCATTC GCGACGACTA CGCCTGGGAC GGCATTCTCC ATCTCGGCAA CTACGCGAAG
CAGTGGAACG CAGACCTCGA CAAGATCACT TTCGACAATT TCAAGTTCGA TAACTTCATG
AAGGAAGTCT ATTTCGACAG CGACACGAAA ATTGGCCTCA TCAGCGCCGC GCCCGCCGAT
CACGGGCCGA ACGTCATCAT GAACAATGAC GGCCTCGCCG ACGCGCGCAA TTTCGTCAAC
AAGGCATCGG GCTCGCGCCG CATGTTGTCC CACACGGTCA TCGCGCCCGG CCAGCCCGGC
TGGCTGGATG AGATAGACCG CGCCATCGAG GTCCTGAAGC CCGACAGCTG GAAGGGCTAC
ACGCTCGGCG ATCCCTTCGA CAATTCGCAA TATCCGTGGC GGCTCGATGA CGAGAAGCTG
ATGTATCCGG CCTATGAGCG AATGGTGAAA GCAGGCATCC GCAATGTCTG CATCCACAAA
GGTCTCCTGC CGGAAGACTA CGAAAATGTC ATCACCCATT GGCGTCACGC CATGGTGGAC
GATGTCGGCC CCGCCGCGCG CGACTGGCCG GAGCTGAACT TCATCATCTA CCACTCCGGC
TTCCGCCCGC TCATGACATC GCCGGATCCG CTCCTCGCGC AGTTTGAACG GACCGGGCGC
ATCGACTGGG TAAGCGATCT CGCCGACATC CCGGAGAAAT ACGGCGTCAC GAATGTCTAT
GCCGAACTCG GCACCACCTT CGGCAGTTGC GCCGTCACCC ATCCGCGCCT CGCCGCCGCC
TTGATGGGCG TCATCATCCG CGGCATGGGC GCCGATCACG TCATCTGGGG AACCGACAGC
GTCTGGTATG GCTCGCCGCA ATGGCAGATC GAAGCCATGC GCCGCATCGA AATCCCCGAA
GACATGCGCA AGGCGCACAA CTTCGCGGCG CTCGGCGCGG CAGACGGGGA AGTGAAAAGC
GCCATCTTCG CCGGCAATGG TTCGCGCCTC TATGGCCTCG AAGATCTCGC AGGCCCCGAT
GCGGCATGGC GAACCGACGC CCTGTCCAGG GTGAAGGCTG AATATGTGGC GGCGGGCGCC
GCGCCCTCCA ACAACTACTA CGGCTTCATC CGCAGTGCCG GAGGGCAGGG CTGA
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| Protein sequence | MWLTDRQRRR VSPAEEDATG TPIPTRIVSN GEYMPMPQTP DQARVESGIL AAADEQGGRL
GMDRRAFLRS GAGLAASFMV MNKVFGGDVF SVAHAETLDP AAAAERAARF ADQYIVDMQL
HFIRDDYAWD GILHLGNYAK QWNADLDKIT FDNFKFDNFM KEVYFDSDTK IGLISAAPAD
HGPNVIMNND GLADARNFVN KASGSRRMLS HTVIAPGQPG WLDEIDRAIE VLKPDSWKGY
TLGDPFDNSQ YPWRLDDEKL MYPAYERMVK AGIRNVCIHK GLLPEDYENV ITHWRHAMVD
DVGPAARDWP ELNFIIYHSG FRPLMTSPDP LLAQFERTGR IDWVSDLADI PEKYGVTNVY
AELGTTFGSC AVTHPRLAAA LMGVIIRGMG ADHVIWGTDS VWYGSPQWQI EAMRRIEIPE
DMRKAHNFAA LGAADGEVKS AIFAGNGSRL YGLEDLAGPD AAWRTDALSR VKAEYVAAGA
APSNNYYGFI RSAGGQG
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