| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1130 |
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| Symbol | |
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| ID | 5453778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1245522 |
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| End bp | 1246409 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876700 |
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| Product | poly(3-hydroxyalkanoate) depolymerase |
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| Protein accession | YP_001412408 |
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| Protein GI | 154251584 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02240] poly(3-hydroxyalkanoate) depolymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACGGAA TGAGTGAAAG ACAACCCCGA TACCGCGAAA TCAGAGTGGG TTCGCATCTT
CTCCGTACTG CGGTTTGGGA GGGCACTGGC GCTCAGACCC CGTTGTTGTT TTTCAACGGC
ATCGGGGCGA ATATCGAACT CATTGCTCCG CTTGCGGATG AATTGTCGGA TAGGGATATC
ATCGCGCTCG ATGCGCCGGG CGTTGGTGGT TCGCCCGCCG CTGCTTTCCC TTATCGTCCG
TGGCAATTCG CACGCATGGC GGCCGGCGTT CTCGACGAGT TAGGTTACGA CGAGGTCGAT
GTTCTCGGCG TTTCCTGGGG CGGCGCGATG GCCCAGCAAT TCGCCTTCCA GTTCAGCAAG
CGGGTGCGCC ACCTTGTGCT CGCCGCCACA TCGGCAGGCA TGTTCATGGT GCCGGGCAAG
CCGAAGGCGT TGATGAAGCT GGCGCATCCG CGCCGCTACA TGGACTCCGA CTACATGATG
AAGCACTTCG AAACCCTCTA TGGCGATGAG GGCGATGGCG CGGATCATTC AAAGCGCCTG
CGTGCGCCGT CCATGCGGGG CTATTTTTAT CAGCTGCTGG CGGGGTTGGG CTGGACGAGC
CTCCCTTTCC TGCCTTTCAT CAAGCAGCCG ACGCTGGTCC TCGCCGGCAA GAACGATCAG
ATCGTGCCGG TGGTCAACGC GCGCATTCTC GCCCATTGCA TTCCCAATGC GCGCCTGGAA
ATAGTCTCGG GCGGCCATCT CTTCCTGGTC TCGCGGCCGG ATGAGGTCAT GCCCCTGATC
CGCGATTTCC TGGACAAGGA GCCCGCCAAG CGCCCTTTCG CAAGTAGCTC GTTCAAGGGC
GAGCGCCGTT TCCGCGGCAC CGGCAAAAGC GTCCGCCCCG CCGTTTGA
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| Protein sequence | MHGMSERQPR YREIRVGSHL LRTAVWEGTG AQTPLLFFNG IGANIELIAP LADELSDRDI
IALDAPGVGG SPAAAFPYRP WQFARMAAGV LDELGYDEVD VLGVSWGGAM AQQFAFQFSK
RVRHLVLAAT SAGMFMVPGK PKALMKLAHP RRYMDSDYMM KHFETLYGDE GDGADHSKRL
RAPSMRGYFY QLLAGLGWTS LPFLPFIKQP TLVLAGKNDQ IVPVVNARIL AHCIPNARLE
IVSGGHLFLV SRPDEVMPLI RDFLDKEPAK RPFASSSFKG ERRFRGTGKS VRPAV
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