| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1129 |
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| Symbol | |
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| ID | 5454265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1243784 |
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| End bp | 1245475 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640876699 |
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| Product | poly-beta-hydroxybutyrate polymerase domain-containing protein |
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| Protein accession | YP_001412407 |
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| Protein GI | 154251583 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01839] poly(R)-hydroxyalkanoic acid synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGC GTCGCGAAGA TATTGTTCCG GGCCTTGGCG AAGAAGCAGC CGAAACGCCG
AATGTCCTCA GTCCCATTGT CGGCATCAGC CGTGAGGATG TGCTCTCTGC CATAGGGTCG
ATCGTGGGTG GCGCTGCGCG CCAGCCCTTC ACCTTCATGC AGCATATCGG CTCATTCGGC
CGCAATGTCG TCGACATCGT CGGCGGCGGA GCGAAGTTCG CGCCCCAACC GAAGGACCGC
CGTTTCATCG ACAGCGCCTG GCAGAAGAGC CCCGTCTATC GCCGCCTCAT GCAGGGGTGG
CTCGCCTTCC AGACTGAAGT GCACGGCTTC ATCAAGTCGC TCGATCTCGA TCCCGTCGAA
CATGGCCGCG CCATGCTCGT CGCGGACATC ATGATCGACG CCGTTGCGCC CACCAACACT
TTCGTTGGCA ATCCCTCCGC TGTGAAGCTT GCGCTCGATA CGGGGGGAAG CTCGCTGGTG
CAGGGCTTCC GCAACGCGAT CGACGATCTG CGCAACAATC ATGGTATGCC GAGCCAGGTC
GACAAGTCCC CGTTCAAGGT CGGCGAAAAT ATAGCGACCA CGGAAGGGGC CGTCGTCTAT
CGCACCGAGA TGCTGGAGCT GCTGCAATAC ACGCCGCAAT CCGGCCAAGT GCACGCGATG
CCGCTTCTCT TCGTGCCGCC TCAGATCAAC AAGTACTATG TGCTCGATCT CACGCCCGAA
AAGAGCATGT CGCGCTACCT CACCACCCAG GGTTTCCAGG TCTTCGTGGT GAGCTGGCGT
AATCCTGGGC CTGAGCATCG CGATTGGGGC CTTGCTGAAT ATGTGGCCGC TCTGGTCGAC
GTCATTGGCG TCGTCTGCGC GATCACGAGT TCCGACAAGG TCAATATCTC GGGTGGCTGT
TCCGGCGGCA TAACAACCGC AACGCTTCTG AGCTACCTCG CCGCAAAGGG CGACAAGCGC
GTCAATTCCG TCACCTTCTG GGTCTGCGTG CTCGACCCTC GAATGGAGGA CAGCGATGTC
GGTGTTCTGG TCACCAAACG GGGTATCGAG ATGGCGCGAA AGCGATCGGC CAAGAAAGGT
GTTCTTGCTG GCTCGGATCT CTCACGCGTT TTCGCGTGGT TGAGGCCGAA CGATCTCATC
TGGAACTATG TCGTGAACAA TTATCTGCAC GGCCAGAAGC CGCCAGCCTT CGATGTTCTG
TTCTGGAATA ATGATTCCAC CAATCTCACC GCCGCTCTGC ACTCGGACTA TCTGTCGCTC
TACGAAACTC AGCCTTTTGC GAATCCGGGT AAGGAACAAA TTCTGGGCGA GCCTATCGAT
CTCGGAAAGG TCGAGATTGA TGCGTTTATC GTTGGTGGCG TGACGGATCA CATCACGCCG
TGGAAAGCCT GCTACAGAAC GACGCAGATG CTCGGTGGAA ACAAGGAATT CGTACTGTCG
AACAGCGGTC ACATCCAAGC AATTCTCAAC CCTCCGGGGA ACCCCAAGGC CAAATACTTC
GTTAATGACA AGCTTCCGTC CACTGCGGAT GAATGGGCCG CTGGCGCTTC GGAAGTTAAC
GGTTCCTGGT GGGAACGCTG GGCAAAATGG CTTGGAGAGC GTTCCGGCGA GATGCAGCCC
GCATCGAAAA AGCTCGGAAA TCGCAAATAC AAGCCTTTGG ATGCAGCCCC GGGCACTTAT
GTATTAGGCT GA
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| Protein sequence | MAKRREDIVP GLGEEAAETP NVLSPIVGIS REDVLSAIGS IVGGAARQPF TFMQHIGSFG
RNVVDIVGGG AKFAPQPKDR RFIDSAWQKS PVYRRLMQGW LAFQTEVHGF IKSLDLDPVE
HGRAMLVADI MIDAVAPTNT FVGNPSAVKL ALDTGGSSLV QGFRNAIDDL RNNHGMPSQV
DKSPFKVGEN IATTEGAVVY RTEMLELLQY TPQSGQVHAM PLLFVPPQIN KYYVLDLTPE
KSMSRYLTTQ GFQVFVVSWR NPGPEHRDWG LAEYVAALVD VIGVVCAITS SDKVNISGGC
SGGITTATLL SYLAAKGDKR VNSVTFWVCV LDPRMEDSDV GVLVTKRGIE MARKRSAKKG
VLAGSDLSRV FAWLRPNDLI WNYVVNNYLH GQKPPAFDVL FWNNDSTNLT AALHSDYLSL
YETQPFANPG KEQILGEPID LGKVEIDAFI VGGVTDHITP WKACYRTTQM LGGNKEFVLS
NSGHIQAILN PPGNPKAKYF VNDKLPSTAD EWAAGASEVN GSWWERWAKW LGERSGEMQP
ASKKLGNRKY KPLDAAPGTY VLG
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