Gene Plav_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1123 
Symbol 
ID5455065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1237474 
End bp1238280 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID640876693 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001412401 
Protein GI154251577 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATG TCGAAAAAGT CGGCGATTTC ATCACCATCG AACGGCAGGG CCGCGTAGCA 
GTCGTCCGTT TTGACAGGGG CGACCGCGTC AATGCGCTGT CAGTTCAGCT TCTGCGGGAC
CTCGGTGCCA CGGCCCGCCT GCTCCGTGAT GACGTCACGA CCAGTGCCAT TGTGCTGGCA
GGTGGCCGCG CCTTTACCGG CGGCGCTGAC CTGACCGACC CGGAAATGGC CAAGCGCGCA
ACGGTCTCTC TGCTCGAACG CCGCGAGATG CTGCGCGCGG GCCCTGACAT GTGCGATGCA
TGGGAGGCGG TCGACCAGGT GACGATCGCT GCCATCGAGA GTTTCTGCAT CGGCGGTGGC
GTCGCGCTTG CCGCCGCCTG CGACTTCAGG ATTGTTGCGC GAGGCGCACA TTTCAGGCTT
CCGGAAATTC CGCTCGGCAT GAACATGAGC TGGCACACTC AGCCCCGCCT CGTGAACCTC
ATTGGCCCCT CCCGCGCCAA ACAGCTTACG ATCTTCGGCG AACGCGTCAC GGCGGAACAG
GCGGAAGCAT GGGGCCTCGC CGACGAAGTC TGCGCTGACG GCGAGGCACT GGCCGCCGCC
CGGCGCTGGG CGGACAAGGT AGCCGCGCTG CCGCCCGTTT CCGTTCGCAT GGCGAAGCGC
GGTATCACGC AGGCCGCGAC CGCGCTCAAT GCCGTTTCCA CCTACATGGA TGCCGACCAG
TTCGCGCTGA CGGCGACGAG CGAAGACCAT CGCGAGGCAG TGACGGCCTT TCTTGAAAAA
CGTTCGCCGA ATTTTACCGG CCGTTGA
 
Protein sequence
MSNVEKVGDF ITIERQGRVA VVRFDRGDRV NALSVQLLRD LGATARLLRD DVTTSAIVLA 
GGRAFTGGAD LTDPEMAKRA TVSLLERREM LRAGPDMCDA WEAVDQVTIA AIESFCIGGG
VALAAACDFR IVARGAHFRL PEIPLGMNMS WHTQPRLVNL IGPSRAKQLT IFGERVTAEQ
AEAWGLADEV CADGEALAAA RRWADKVAAL PPVSVRMAKR GITQAATALN AVSTYMDADQ
FALTATSEDH REAVTAFLEK RSPNFTGR